Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26,08■■□□□ 1,77
Tpm1P58771 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Tpm1P58771 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26,06■■□□□ 1,76
Tpm1P58771 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26,06■■□□□ 1,76
Tpm1P58771 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26,06■■□□□ 1,76
Tpm1P58771 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26,05■■□□□ 1,76
Tpm1P58771 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26,05■■□□□ 1,76
Tpm1P58771 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Tpm1P58771 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26,05■■□□□ 1,76
Tpm1P58771 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Tpm1P58771 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Tpm1P58771 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Tpm1P58771 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26,03■■□□□ 1,76
Tpm1P58771 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Tpm1P58771 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26,02■■□□□ 1,76
Tpm1P58771 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Tpm1P58771 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26,01■■□□□ 1,75
Tpm1P58771 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26,01■■□□□ 1,75
Tpm1P58771 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Tpm1P58771 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Tpm1P58771 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Tpm1P58771 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Tpm1P58771 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25,99■■□□□ 1,75
Tpm1P58771 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Tpm1P58771 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25,99■■□□□ 1,75
Tpm1P58771 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25,98■■□□□ 1,75
Tpm1P58771 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25,98■■□□□ 1,75
Tpm1P58771 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25,98■■□□□ 1,75
Tpm1P58771 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25,97■■□□□ 1,75
Tpm1P58771 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25,97■■□□□ 1,75
Tpm1P58771 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Tpm1P58771 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Tpm1P58771 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25,96■■□□□ 1,75
Tpm1P58771 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Tpm1P58771 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Tpm1P58771 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25,96■■□□□ 1,75
Tpm1P58771 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC25,96■■□□□ 1,75
Tpm1P58771 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,75
Tpm1P58771 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25,95■■□□□ 1,74
Tpm1P58771 Il17rd-202ENSMUST00000223942 2186 ntBASIC25,95■■□□□ 1,74
Tpm1P58771 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25,94■■□□□ 1,74
Tpm1P58771 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25,94■■□□□ 1,74
Tpm1P58771 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Tpm1P58771 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25,94■■□□□ 1,74
Tpm1P58771 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Tpm1P58771 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Tpm1P58771 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Tpm1P58771 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25,93■■□□□ 1,74
Tpm1P58771 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Tpm1P58771 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Tpm1P58771 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Tpm1P58771 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Tpm1P58771 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25,91■■□□□ 1,74
Tpm1P58771 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Tpm1P58771 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25,91■■□□□ 1,74
Tpm1P58771 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Tpm1P58771 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Tpm1P58771 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25,89■■□□□ 1,73
Tpm1P58771 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Tpm1P58771 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25,88■■□□□ 1,73
Tpm1P58771 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC25,87■■□□□ 1,73
Tpm1P58771 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Tpm1P58771 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Tpm1P58771 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Tpm1P58771 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25,87■■□□□ 1,73
Tpm1P58771 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25,87■■□□□ 1,73
Tpm1P58771 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25,86■■□□□ 1,73
Tpm1P58771 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25,86■■□□□ 1,73
Tpm1P58771 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Tpm1P58771 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25,85■■□□□ 1,73
Tpm1P58771 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Tpm1P58771 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25,85■■□□□ 1,73
Tpm1P58771 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Tpm1P58771 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25,85■■□□□ 1,73
Tpm1P58771 Gm17641-201ENSMUST00000166328 2350 ntBASIC25,84■■□□□ 1,73
Tpm1P58771 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Tpm1P58771 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Tpm1P58771 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25,84■■□□□ 1,73
Tpm1P58771 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25,84■■□□□ 1,73
Tpm1P58771 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,73
Tpm1P58771 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25,82■■□□□ 1,72
Tpm1P58771 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25,81■■□□□ 1,72
Tpm1P58771 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25,81■■□□□ 1,72
Tpm1P58771 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25,81■■□□□ 1,72
Tpm1P58771 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Tpm1P58771 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Tpm1P58771 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25,8■■□□□ 1,72
Tpm1P58771 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25,8■■□□□ 1,72
Tpm1P58771 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC25,8■■□□□ 1,72
Tpm1P58771 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25,8■■□□□ 1,72
Tpm1P58771 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Tpm1P58771 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25,79■■□□□ 1,72
Tpm1P58771 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Tpm1P58771 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25,79■■□□□ 1,72
Tpm1P58771 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25,79■■□□□ 1,72
Tpm1P58771 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25,79■■□□□ 1,72
Tpm1P58771 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Tpm1P58771 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25,78■■□□□ 1,72
Tpm1P58771 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25,78■■□□□ 1,72
Tpm1P58771 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25,77■■□□□ 1,72
Retrieved 100 of 76,532 protein–RNA pairs in 22,4 ms