Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx4P53776 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Lhx4P53776 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.76■□□□□ 0.75
Lhx4P53776 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx4P53776 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx4P53776 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx4P53776 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx4P53776 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lhx4P53776 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx4P53776 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx4P53776 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx4P53776 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx4P53776 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lhx4P53776 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Lhx4P53776 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx4P53776 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx4P53776 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx4P53776 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx4P53776 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Lhx4P53776 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx4P53776 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lhx4P53776 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lhx4P53776 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.69■□□□□ 0.74
Lhx4P53776 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.69■□□□□ 0.74
Lhx4P53776 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Lhx4P53776 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx4P53776 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.68■□□□□ 0.74
Lhx4P53776 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx4P53776 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx4P53776 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx4P53776 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx4P53776 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Lhx4P53776 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Lhx4P53776 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx4P53776 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx4P53776 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx4P53776 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Lhx4P53776 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx4P53776 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx4P53776 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx4P53776 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx4P53776 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx4P53776 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx4P53776 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.63■□□□□ 0.73
Lhx4P53776 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx4P53776 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.62■□□□□ 0.73
Lhx4P53776 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx4P53776 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx4P53776 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx4P53776 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx4P53776 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx4P53776 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.61■□□□□ 0.73
Lhx4P53776 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.61■□□□□ 0.73
Lhx4P53776 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx4P53776 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx4P53776 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx4P53776 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx4P53776 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx4P53776 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx4P53776 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Lhx4P53776 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx4P53776 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lhx4P53776 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx4P53776 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx4P53776 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lhx4P53776 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx4P53776 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx4P53776 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lhx4P53776 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Lhx4P53776 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.56■□□□□ 0.72
Lhx4P53776 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.56■□□□□ 0.72
Lhx4P53776 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx4P53776 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lhx4P53776 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx4P53776 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx4P53776 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx4P53776 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Lhx4P53776 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lhx4P53776 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx4P53776 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.55■□□□□ 0.72
Lhx4P53776 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx4P53776 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx4P53776 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx4P53776 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx4P53776 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.54■□□□□ 0.72
Lhx4P53776 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.54■□□□□ 0.72
Lhx4P53776 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Lhx4P53776 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx4P53776 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.53■□□□□ 0.72
Lhx4P53776 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.52■□□□□ 0.72
Lhx4P53776 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.52■□□□□ 0.72
Lhx4P53776 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx4P53776 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx4P53776 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx4P53776 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx4P53776 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx4P53776 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.5■□□□□ 0.71
Lhx4P53776 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx4P53776 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx4P53776 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms