Protein–RNA interactions for Protein: P52800

Efnb2, Ephrin-B2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb2P52800 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Efnb2P52800 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Efnb2P52800 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Efnb2P52800 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.39■□□□□ 0.69
Efnb2P52800 Gm26115-201ENSMUST00000175605 87 ntBASIC19.39■□□□□ 0.69
Efnb2P52800 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Efnb2P52800 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Efnb2P52800 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Efnb2P52800 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Efnb2P52800 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Efnb2P52800 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Efnb2P52800 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Efnb2P52800 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Efnb2P52800 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Efnb2P52800 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Efnb2P52800 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.37■□□□□ 0.69
Efnb2P52800 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Efnb2P52800 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb2P52800 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb2P52800 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb2P52800 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb2P52800 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb2P52800 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb2P52800 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Efnb2P52800 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.35■□□□□ 0.69
Efnb2P52800 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Efnb2P52800 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Efnb2P52800 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Efnb2P52800 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Efnb2P52800 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Efnb2P52800 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Efnb2P52800 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Efnb2P52800 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Efnb2P52800 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Efnb2P52800 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Efnb2P52800 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Efnb2P52800 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Efnb2P52800 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Efnb2P52800 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.3■□□□□ 0.68
Efnb2P52800 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.3■□□□□ 0.68
Efnb2P52800 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb2P52800 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb2P52800 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb2P52800 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Efnb2P52800 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb2P52800 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb2P52800 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb2P52800 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Efnb2P52800 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Efnb2P52800 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Efnb2P52800 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Efnb2P52800 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Efnb2P52800 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Efnb2P52800 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Efnb2P52800 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.28■□□□□ 0.68
Efnb2P52800 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Efnb2P52800 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Efnb2P52800 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Efnb2P52800 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Efnb2P52800 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Efnb2P52800 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Efnb2P52800 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Efnb2P52800 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Efnb2P52800 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Efnb2P52800 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Efnb2P52800 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Efnb2P52800 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Efnb2P52800 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Efnb2P52800 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Efnb2P52800 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Efnb2P52800 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Efnb2P52800 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Efnb2P52800 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Efnb2P52800 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Efnb2P52800 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Efnb2P52800 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Efnb2P52800 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Efnb2P52800 Gm16148-201ENSMUST00000119653 893 ntBASIC19.22■□□□□ 0.67
Efnb2P52800 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.22■□□□□ 0.67
Efnb2P52800 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Efnb2P52800 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Efnb2P52800 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Efnb2P52800 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Efnb2P52800 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Efnb2P52800 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Efnb2P52800 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Efnb2P52800 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Efnb2P52800 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Efnb2P52800 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Efnb2P52800 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Efnb2P52800 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Efnb2P52800 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Efnb2P52800 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Efnb2P52800 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Efnb2P52800 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Efnb2P52800 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Efnb2P52800 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Efnb2P52800 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Efnb2P52800 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Efnb2P52800 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms