Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rph3aP47708 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rph3aP47708 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Rph3aP47708 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rph3aP47708 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rph3aP47708 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rph3aP47708 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Rph3aP47708 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rph3aP47708 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rph3aP47708 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Rph3aP47708 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Rph3aP47708 Gm8503-201ENSMUST00000118131 455 ntBASIC22.6■■□□□ 1.21
Rph3aP47708 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.59■■□□□ 1.21
Rph3aP47708 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.58■■□□□ 1.21
Rph3aP47708 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Rph3aP47708 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Rph3aP47708 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.57■■□□□ 1.2
Rph3aP47708 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.57■■□□□ 1.2
Rph3aP47708 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Rph3aP47708 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.57■■□□□ 1.2
Rph3aP47708 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rph3aP47708 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rph3aP47708 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.56■■□□□ 1.2
Rph3aP47708 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.55■■□□□ 1.2
Rph3aP47708 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rph3aP47708 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.55■■□□□ 1.2
Rph3aP47708 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.54■■□□□ 1.2
Rph3aP47708 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Rph3aP47708 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rph3aP47708 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rph3aP47708 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rph3aP47708 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.53■■□□□ 1.2
Rph3aP47708 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rph3aP47708 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rph3aP47708 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rph3aP47708 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.52■■□□□ 1.2
Rph3aP47708 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rph3aP47708 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rph3aP47708 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rph3aP47708 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rph3aP47708 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.51■■□□□ 1.19
Rph3aP47708 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Rph3aP47708 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rph3aP47708 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rph3aP47708 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rph3aP47708 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.5■■□□□ 1.19
Rph3aP47708 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rph3aP47708 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rph3aP47708 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rph3aP47708 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rph3aP47708 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rph3aP47708 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rph3aP47708 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rph3aP47708 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rph3aP47708 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Rph3aP47708 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.48■■□□□ 1.19
Rph3aP47708 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rph3aP47708 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rph3aP47708 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Rph3aP47708 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.47■■□□□ 1.19
Rph3aP47708 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rph3aP47708 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rph3aP47708 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Rph3aP47708 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
Rph3aP47708 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rph3aP47708 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Rph3aP47708 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rph3aP47708 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.45■■□□□ 1.18
Rph3aP47708 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
Rph3aP47708 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.44■■□□□ 1.18
Rph3aP47708 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
Rph3aP47708 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rph3aP47708 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rph3aP47708 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.43■■□□□ 1.18
Rph3aP47708 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rph3aP47708 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rph3aP47708 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rph3aP47708 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rph3aP47708 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rph3aP47708 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rph3aP47708 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rph3aP47708 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rph3aP47708 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Rph3aP47708 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rph3aP47708 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rph3aP47708 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Rph3aP47708 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rph3aP47708 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rph3aP47708 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rph3aP47708 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rph3aP47708 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.34■■□□□ 1.17
Rph3aP47708 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rph3aP47708 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rph3aP47708 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rph3aP47708 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rph3aP47708 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rph3aP47708 Particl-201ENSMUST00000205370 1560 ntBASIC22.32■■□□□ 1.16
Rph3aP47708 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rph3aP47708 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.31■■□□□ 1.16
Rph3aP47708 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms