Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.56■□□□□ 0.72
Mmp9P41245 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp9P41245 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp9P41245 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp9P41245 Peli2-204ENSMUST00000226513 1320 ntBASIC19.56■□□□□ 0.72
Mmp9P41245 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp9P41245 Gm16148-201ENSMUST00000119653 893 ntBASIC19.56■□□□□ 0.72
Mmp9P41245 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp9P41245 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Mmp9P41245 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp9P41245 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp9P41245 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Mmp9P41245 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp9P41245 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp9P41245 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp9P41245 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Mmp9P41245 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.52■□□□□ 0.72
Mmp9P41245 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp9P41245 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.52■□□□□ 0.71
Mmp9P41245 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.51■□□□□ 0.71
Mmp9P41245 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp9P41245 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Mmp9P41245 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp9P41245 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp9P41245 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Mmp9P41245 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp9P41245 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.5■□□□□ 0.71
Mmp9P41245 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.5■□□□□ 0.71
Mmp9P41245 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Mmp9P41245 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp9P41245 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp9P41245 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp9P41245 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp9P41245 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp9P41245 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Mmp9P41245 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp9P41245 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mmp9P41245 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.47■□□□□ 0.71
Mmp9P41245 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp9P41245 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp9P41245 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp9P41245 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp9P41245 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Mmp9P41245 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Mmp9P41245 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.46■□□□□ 0.71
Mmp9P41245 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp9P41245 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp9P41245 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Mmp9P41245 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Mmp9P41245 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Mmp9P41245 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp9P41245 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp9P41245 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp9P41245 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp9P41245 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp9P41245 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp9P41245 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp9P41245 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Mmp9P41245 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp9P41245 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp9P41245 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp9P41245 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp9P41245 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp9P41245 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp9P41245 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp9P41245 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp9P41245 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp9P41245 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp9P41245 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp9P41245 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mmp9P41245 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp9P41245 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp9P41245 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp9P41245 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp9P41245 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp9P41245 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp9P41245 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp9P41245 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp9P41245 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp9P41245 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp9P41245 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp9P41245 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp9P41245 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp9P41245 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp9P41245 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp9P41245 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp9P41245 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp9P41245 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Mmp9P41245 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.36■□□□□ 0.69
Mmp9P41245 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp9P41245 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Mmp9P41245 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp9P41245 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp9P41245 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp9P41245 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp9P41245 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.35■□□□□ 0.69
Mmp9P41245 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Mmp9P41245 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp9P41245 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Mmp9P41245 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms