Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 SHC1YER096W 1539 nt8.66□□□□□ -1.02
UBP5P39944 CHS7YHR142W 951 nt8.66□□□□□ -1.02
UBP5P39944 tD(GUC)BtD(GUC)B 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)DtD(GUC)D 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)G1tD(GUC)G1 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)G2tD(GUC)G2 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)I1tD(GUC)I1 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)I2tD(GUC)I2 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)J1tD(GUC)J1 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)J2tD(GUC)J2 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)J3tD(GUC)J3 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)J4tD(GUC)J4 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)KtD(GUC)K 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)L1tD(GUC)L1 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)L2tD(GUC)L2 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)MtD(GUC)M 72 nt8.65□□□□□ -1.02
UBP5P39944 tD(GUC)OtD(GUC)O 72 nt8.65□□□□□ -1.02
UBP5P39944 YIR035CYIR035C 765 nt8.65□□□□□ -1.02
UBP5P39944 HRA1HRA1 564 nt8.65□□□□□ -1.02
UBP5P39944 UTR5YEL035C 501 nt8.64□□□□□ -1.03
UBP5P39944 FRE6YLL051C 2139 nt8.63□□□□□ -1.03
UBP5P39944 YMR210WYMR210W 1350 nt8.63□□□□□ -1.03
UBP5P39944 FTH1YBR207W 1398 nt8.63□□□□□ -1.03
UBP5P39944 YIR018C-AYIR018C-A 138 nt8.63□□□□□ -1.03
UBP5P39944 YAL016C-AYAL016C-A 315 nt8.63□□□□□ -1.03
UBP5P39944 OLA1YBR025C 1185 nt8.63□□□□□ -1.03
UBP5P39944 LEA1YPL213W 717 nt8.62□□□□□ -1.03
UBP5P39944 RHO1YPR165W 630 nt8.62□□□□□ -1.03
UBP5P39944 LRO1YNR008W 1986 nt8.61□□□□□ -1.03
UBP5P39944 RPL12BYDR418W 498 nt8.61□□□□□ -1.03
UBP5P39944 RRT14YIL127C 621 nt8.6□□□□□ -1.03
UBP5P39944 SRN2YLR119W 642 nt8.6□□□□□ -1.03
UBP5P39944 BXI1YNL305C 894 nt8.6□□□□□ -1.03
UBP5P39944 RPS6AYPL090C 711 nt8.6□□□□□ -1.03
UBP5P39944 RPS6BYBR181C 711 nt8.6□□□□□ -1.03
UBP5P39944 THI73YLR004C 1572 nt8.6□□□□□ -1.03
UBP5P39944 EHT1YBR177C 1356 nt8.6□□□□□ -1.03
UBP5P39944 INO1YJL153C 1602 nt8.59□□□□□ -1.03
UBP5P39944 HIS3YOR202W 663 nt8.59□□□□□ -1.03
UBP5P39944 ARA2YMR041C 1008 nt8.58□□□□□ -1.04
UBP5P39944 SFP1YLR403W 2052 nt8.57□□□□□ -1.04
UBP5P39944 HXT8YJL214W 1710 nt8.56□□□□□ -1.04
UBP5P39944 NPP1YCR026C 2229 nt8.56□□□□□ -1.04
UBP5P39944 MRP1YDR347W 966 nt8.55□□□□□ -1.04
UBP5P39944 MIM1YOL026C 342 nt8.55□□□□□ -1.04
UBP5P39944 DIP5YPL265W 1827 nt8.54□□□□□ -1.04
UBP5P39944 PUP3YER094C 618 nt8.53□□□□□ -1.04
UBP5P39944 MRN1YPL184C 1839 nt8.52□□□□□ -1.04
UBP5P39944 YER156CYER156C 1017 nt8.52□□□□□ -1.05
UBP5P39944 BUD31YCR063W 474 nt8.51□□□□□ -1.05
UBP5P39944 YOR268CYOR268C 399 nt8.51□□□□□ -1.05
UBP5P39944 DUR3YHL016C 2208 nt8.5□□□□□ -1.05
UBP5P39944 GDH1YOR375C 1365 nt8.5□□□□□ -1.05
UBP5P39944 HBS1YKR084C 1836 nt8.5□□□□□ -1.05
UBP5P39944 ARO3YDR035W 1113 nt8.5□□□□□ -1.05
UBP5P39944 YPT31YER031C 672 nt8.5□□□□□ -1.05
UBP5P39944 KAE1YKR038C 1161 nt8.49□□□□□ -1.05
UBP5P39944 tL(UAA)B1tL(UAA)B1 84 nt8.48□□□□□ -1.05
UBP5P39944 tL(UAA)B2tL(UAA)B2 84 nt8.48□□□□□ -1.05
UBP5P39944 tL(UAA)DtL(UAA)D 84 nt8.48□□□□□ -1.05
UBP5P39944 SUP51tL(UAA)J 84 nt8.48□□□□□ -1.05
UBP5P39944 tL(UAA)KtL(UAA)K 84 nt8.48□□□□□ -1.05
UBP5P39944 tL(UAA)LtL(UAA)L 84 nt8.48□□□□□ -1.05
UBP5P39944 tL(UAA)NtL(UAA)N 84 nt8.48□□□□□ -1.05
UBP5P39944 YHL030W-AYHL030W-A 462 nt8.48□□□□□ -1.05
UBP5P39944 YOR072WYOR072W 315 nt8.48□□□□□ -1.05
UBP5P39944 JHD1YER051W 1479 nt8.48□□□□□ -1.05
UBP5P39944 ADA2YDR448W 1305 nt8.48□□□□□ -1.05
UBP5P39944 ARP10YDR106W 855 nt8.47□□□□□ -1.05
UBP5P39944 MFT1YML062C 1179 nt8.47□□□□□ -1.05
UBP5P39944 ORT1YOR130C 879 nt8.47□□□□□ -1.05
UBP5P39944 ALG7YBR243C 1347 nt8.47□□□□□ -1.05
UBP5P39944 ALD5YER073W 1563 nt8.47□□□□□ -1.05
UBP5P39944 WSC4YHL028W 1818 nt8.47□□□□□ -1.05
UBP5P39944 MEX67YPL169C 1800 nt8.46□□□□□ -1.06
UBP5P39944 YEL009C-AYEL009C-A 408 nt8.46□□□□□ -1.06
UBP5P39944 YIL168WYIL168W 384 nt8.46□□□□□ -1.06
UBP5P39944 snR4snR4 186 nt8.46□□□□□ -1.06
UBP5P39944 ATP2YJR121W 1536 nt8.45□□□□□ -1.06
UBP5P39944 NDE2YDL085W 1638 nt8.45□□□□□ -1.06
UBP5P39944 BSP1YPR171W 1731 nt8.45□□□□□ -1.06
UBP5P39944 AI5_BETAQ0075 1065 nt8.44□□□□□ -1.06
UBP5P39944 GLY1YEL046C 1164 nt8.44□□□□□ -1.06
UBP5P39944 YLR122CYLR122C 378 nt8.44□□□□□ -1.06
UBP5P39944 ESBP6YNL125C 2022 nt8.43□□□□□ -1.06
UBP5P39944 RCF1YML030W 480 nt8.43□□□□□ -1.06
UBP5P39944 YMR206WYMR206W 942 nt8.43□□□□□ -1.06
UBP5P39944 TGL5YOR081C 2250 nt8.43□□□□□ -1.06
UBP5P39944 TIM50YPL063W 1431 nt8.43□□□□□ -1.06
UBP5P39944 TAD2YJL035C 753 nt8.42□□□□□ -1.06
UBP5P39944 MRP7YNL005C 1116 nt8.42□□□□□ -1.06
UBP5P39944 YPR084WYPR084W 1371 nt8.42□□□□□ -1.06
UBP5P39944 HXK1YFR053C 1458 nt8.42□□□□□ -1.06
UBP5P39944 MTC6YHR151C 1581 nt8.41□□□□□ -1.06
UBP5P39944 ELP6YMR312W 822 nt8.41□□□□□ -1.06
UBP5P39944 YNL140CYNL140C 570 nt8.41□□□□□ -1.06
UBP5P39944 ELP4YPL101W 1371 nt8.4□□□□□ -1.06
UBP5P39944 TOS1YBR162C 1368 nt8.4□□□□□ -1.06
UBP5P39944 TIF3YPR163C 1311 nt8.4□□□□□ -1.06
UBP5P39944 EDC2YER035W 438 nt8.4□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms