Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Thbs1P35441 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Thbs1P35441 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Thbs1P35441 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Thbs1P35441 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Thbs1P35441 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Thbs1P35441 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Thbs1P35441 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.82■■□□□ 1.08
Thbs1P35441 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Thbs1P35441 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Thbs1P35441 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Thbs1P35441 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.8■■□□□ 1.08
Thbs1P35441 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Thbs1P35441 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Thbs1P35441 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Thbs1P35441 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Thbs1P35441 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Thbs1P35441 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Thbs1P35441 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Thbs1P35441 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Thbs1P35441 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.78■■□□□ 1.08
Thbs1P35441 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Thbs1P35441 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Thbs1P35441 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.78■■□□□ 1.08
Thbs1P35441 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Thbs1P35441 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Thbs1P35441 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Thbs1P35441 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Thbs1P35441 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Thbs1P35441 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Thbs1P35441 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.74■■□□□ 1.07
Thbs1P35441 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Thbs1P35441 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Thbs1P35441 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Thbs1P35441 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Thbs1P35441 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Thbs1P35441 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Thbs1P35441 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Thbs1P35441 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Thbs1P35441 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Thbs1P35441 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thbs1P35441 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thbs1P35441 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.69■■□□□ 1.06
Thbs1P35441 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.69■■□□□ 1.06
Thbs1P35441 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.69■■□□□ 1.06
Thbs1P35441 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thbs1P35441 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Thbs1P35441 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Thbs1P35441 Particl-201ENSMUST00000205370 1560 ntBASIC21.68■■□□□ 1.06
Thbs1P35441 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Thbs1P35441 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Thbs1P35441 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Thbs1P35441 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Thbs1P35441 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Thbs1P35441 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Thbs1P35441 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Thbs1P35441 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
Thbs1P35441 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Thbs1P35441 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Thbs1P35441 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Thbs1P35441 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.63■■□□□ 1.05
Thbs1P35441 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Thbs1P35441 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Thbs1P35441 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Thbs1P35441 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Thbs1P35441 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Thbs1P35441 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Thbs1P35441 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Thbs1P35441 Nkain2-201ENSMUST00000092602 558 ntBASIC21.61■■□□□ 1.05
Thbs1P35441 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Thbs1P35441 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.6■■□□□ 1.05
Thbs1P35441 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Thbs1P35441 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Thbs1P35441 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Thbs1P35441 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Thbs1P35441 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Thbs1P35441 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Thbs1P35441 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Thbs1P35441 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Thbs1P35441 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.58■■□□□ 1.05
Thbs1P35441 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Thbs1P35441 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Thbs1P35441 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Thbs1P35441 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Thbs1P35441 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.55■■□□□ 1.04
Thbs1P35441 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thbs1P35441 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thbs1P35441 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thbs1P35441 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Thbs1P35441 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Thbs1P35441 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Thbs1P35441 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Thbs1P35441 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thbs1P35441 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thbs1P35441 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thbs1P35441 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thbs1P35441 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thbs1P35441 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Thbs1P35441 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Thbs1P35441 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms