Protein–RNA interactions for Protein: P28571

Slc6a9, Sodium- and chloride-dependent glycine transporter 1, mousemouse

Predictions only

Length 692 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a9P28571 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc6a9P28571 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a9P28571 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a9P28571 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Slc6a9P28571 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Slc6a9P28571 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a9P28571 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Slc6a9P28571 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a9P28571 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a9P28571 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a9P28571 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.5■□□□□ 0.71
Slc6a9P28571 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a9P28571 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a9P28571 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a9P28571 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a9P28571 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.49■□□□□ 0.71
Slc6a9P28571 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a9P28571 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a9P28571 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a9P28571 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a9P28571 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a9P28571 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a9P28571 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a9P28571 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a9P28571 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.43■□□□□ 0.7
Slc6a9P28571 Gm9397-201ENSMUST00000200125 605 ntBASIC19.43■□□□□ 0.7
Slc6a9P28571 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a9P28571 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a9P28571 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a9P28571 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Slc6a9P28571 Gm24970-201ENSMUST00000175582 82 ntBASIC19.42■□□□□ 0.7
Slc6a9P28571 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.42■□□□□ 0.7
Slc6a9P28571 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a9P28571 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a9P28571 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a9P28571 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a9P28571 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.41■□□□□ 0.7
Slc6a9P28571 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a9P28571 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a9P28571 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a9P28571 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.4■□□□□ 0.7
Slc6a9P28571 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc6a9P28571 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a9P28571 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a9P28571 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a9P28571 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.38■□□□□ 0.69
Slc6a9P28571 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a9P28571 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a9P28571 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a9P28571 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a9P28571 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a9P28571 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a9P28571 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a9P28571 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc6a9P28571 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a9P28571 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a9P28571 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.33■□□□□ 0.69
Slc6a9P28571 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a9P28571 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a9P28571 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.32■□□□□ 0.68
Slc6a9P28571 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a9P28571 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a9P28571 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a9P28571 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.31■□□□□ 0.68
Slc6a9P28571 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Slc6a9P28571 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Slc6a9P28571 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Gm45855-201ENSMUST00000212546 880 ntBASIC19.3■□□□□ 0.68
Slc6a9P28571 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms