Protein–RNA interactions for Protein: P28571

Slc6a9, Sodium- and chloride-dependent glycine transporter 1, mousemouse

Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a9P28571 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc6a9P28571 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a9P28571 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a9P28571 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a9P28571 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Slc6a9P28571 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Slc6a9P28571 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a9P28571 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Slc6a9P28571 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a9P28571 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a9P28571 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a9P28571 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.5■□□□□ 0.71
Slc6a9P28571 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a9P28571 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a9P28571 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a9P28571 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a9P28571 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.49■□□□□ 0.71
Slc6a9P28571 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a9P28571 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a9P28571 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a9P28571 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a9P28571 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a9P28571 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a9P28571 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a9P28571 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a9P28571 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a9P28571 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a9P28571 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.43■□□□□ 0.7
Slc6a9P28571 Gm9397-201ENSMUST00000200125 605 ntBASIC19.43■□□□□ 0.7
Slc6a9P28571 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a9P28571 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a9P28571 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a9P28571 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Slc6a9P28571 Gm24970-201ENSMUST00000175582 82 ntBASIC19.42■□□□□ 0.7
Slc6a9P28571 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.42■□□□□ 0.7
Slc6a9P28571 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a9P28571 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a9P28571 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a9P28571 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a9P28571 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.41■□□□□ 0.7
Slc6a9P28571 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a9P28571 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a9P28571 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a9P28571 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.4■□□□□ 0.7
Slc6a9P28571 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a9P28571 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc6a9P28571 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a9P28571 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a9P28571 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a9P28571 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.38■□□□□ 0.69
Slc6a9P28571 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a9P28571 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a9P28571 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a9P28571 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a9P28571 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a9P28571 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a9P28571 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a9P28571 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a9P28571 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc6a9P28571 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a9P28571 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a9P28571 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.33■□□□□ 0.69
Slc6a9P28571 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a9P28571 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a9P28571 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.32■□□□□ 0.68
Slc6a9P28571 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a9P28571 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a9P28571 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a9P28571 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a9P28571 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.31■□□□□ 0.68
Slc6a9P28571 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Slc6a9P28571 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Slc6a9P28571 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Gm45855-201ENSMUST00000212546 880 ntBASIC19.3■□□□□ 0.68
Slc6a9P28571 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a9P28571 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms