Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ly6c1P0CW02 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Ly6c1P0CW02 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.8■□□□□ 0.76
Ly6c1P0CW02 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ly6c1P0CW02 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ly6c1P0CW02 Gm7432-201ENSMUST00000210343 879 ntBASIC19.79■□□□□ 0.76
Ly6c1P0CW02 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ly6c1P0CW02 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.78■□□□□ 0.76
Ly6c1P0CW02 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ly6c1P0CW02 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ly6c1P0CW02 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ly6c1P0CW02 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ly6c1P0CW02 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
Ly6c1P0CW02 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ly6c1P0CW02 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ly6c1P0CW02 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ly6c1P0CW02 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ly6c1P0CW02 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ly6c1P0CW02 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.75■□□□□ 0.75
Ly6c1P0CW02 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ly6c1P0CW02 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ly6c1P0CW02 Particl-201ENSMUST00000205370 1560 ntBASIC19.74■□□□□ 0.75
Ly6c1P0CW02 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ly6c1P0CW02 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.73■□□□□ 0.75
Ly6c1P0CW02 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ly6c1P0CW02 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ly6c1P0CW02 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.71■□□□□ 0.75
Ly6c1P0CW02 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ly6c1P0CW02 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.71■□□□□ 0.75
Ly6c1P0CW02 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ly6c1P0CW02 Gm11599-201ENSMUST00000118720 878 ntBASIC19.7■□□□□ 0.74
Ly6c1P0CW02 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ly6c1P0CW02 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ly6c1P0CW02 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ly6c1P0CW02 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.69■□□□□ 0.74
Ly6c1P0CW02 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ly6c1P0CW02 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.68■□□□□ 0.74
Ly6c1P0CW02 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ly6c1P0CW02 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ly6c1P0CW02 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ly6c1P0CW02 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ly6c1P0CW02 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ly6c1P0CW02 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ly6c1P0CW02 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ly6c1P0CW02 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ly6c1P0CW02 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ly6c1P0CW02 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ly6c1P0CW02 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ly6c1P0CW02 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ly6c1P0CW02 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.65■□□□□ 0.74
Ly6c1P0CW02 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ly6c1P0CW02 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ly6c1P0CW02 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ly6c1P0CW02 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.64■□□□□ 0.73
Ly6c1P0CW02 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ly6c1P0CW02 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ly6c1P0CW02 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.63■□□□□ 0.73
Ly6c1P0CW02 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ly6c1P0CW02 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ly6c1P0CW02 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ly6c1P0CW02 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ly6c1P0CW02 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ly6c1P0CW02 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ly6c1P0CW02 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ly6c1P0CW02 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ly6c1P0CW02 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ly6c1P0CW02 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ly6c1P0CW02 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.6■□□□□ 0.73
Ly6c1P0CW02 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ly6c1P0CW02 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ly6c1P0CW02 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ly6c1P0CW02 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.59■□□□□ 0.73
Ly6c1P0CW02 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.59■□□□□ 0.73
Ly6c1P0CW02 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ly6c1P0CW02 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.58■□□□□ 0.73
Ly6c1P0CW02 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ly6c1P0CW02 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ly6c1P0CW02 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ly6c1P0CW02 Gm37136-201ENSMUST00000194368 194 ntBASIC19.57■□□□□ 0.72
Ly6c1P0CW02 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ly6c1P0CW02 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ly6c1P0CW02 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ly6c1P0CW02 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ly6c1P0CW02 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ly6c1P0CW02 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ly6c1P0CW02 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ly6c1P0CW02 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ly6c1P0CW02 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ly6c1P0CW02 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ly6c1P0CW02 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ly6c1P0CW02 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ly6c1P0CW02 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ly6c1P0CW02 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ly6c1P0CW02 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ly6c1P0CW02 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ly6c1P0CW02 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ly6c1P0CW02 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ly6c1P0CW02 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.51■□□□□ 0.71
Ly6c1P0CW02 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ly6c1P0CW02 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms