Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
P06328 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06328 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P06328 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06328 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06328 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06328 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06328 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06328 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06328 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06328 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.17■□□□□ 0.34
P06328 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P06328 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.16■□□□□ 0.34
P06328 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06328 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
P06328 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P06328 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P06328 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P06328 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P06328 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.14■□□□□ 0.33
P06328 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.14■□□□□ 0.33
P06328 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P06328 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P06328 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P06328 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06328 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06328 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06328 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06328 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
P06328 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06328 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P06328 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06328 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06328 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06328 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06328 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
P06328 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P06328 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.11■□□□□ 0.33
P06328 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P06328 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06328 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.1■□□□□ 0.33
P06328 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
P06328 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.1■□□□□ 0.33
P06328 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06328 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06328 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06328 Gm30023-201ENSMUST00000197970 889 ntBASIC17.09■□□□□ 0.33
P06328 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P06328 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P06328 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06328 Gm45855-201ENSMUST00000212546 880 ntBASIC17.08■□□□□ 0.32
P06328 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06328 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06328 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P06328 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.07■□□□□ 0.32
P06328 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06328 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06328 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06328 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P06328 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
P06328 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P06328 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06328 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06328 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06328 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06328 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06328 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06328 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.04■□□□□ 0.32
P06328 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P06328 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06328 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
P06328 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.04■□□□□ 0.32
P06328 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.04■□□□□ 0.32
P06328 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P06328 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P06328 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
P06328 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
P06328 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
P06328 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P06328 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P06328 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P06328 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06328 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06328 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P06328 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P06328 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P06328 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
P06328 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17■□□□□ 0.31
P06328 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P06328 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P06328 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
P06328 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
P06328 Particl-201ENSMUST00000205370 1560 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms