Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
P04945 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04945 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
P04945 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04945 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
P04945 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.38■□□□□ 0.85
P04945 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04945 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04945 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04945 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.37■□□□□ 0.85
P04945 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
P04945 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04945 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04945 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04945 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
P04945 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04945 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
P04945 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04945 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P04945 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
P04945 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04945 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
P04945 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04945 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P04945 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04945 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04945 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P04945 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04945 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04945 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.33■□□□□ 0.84
P04945 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
P04945 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
P04945 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04945 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04945 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
P04945 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04945 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04945 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04945 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P04945 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.3■□□□□ 0.84
P04945 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04945 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
P04945 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04945 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.28■□□□□ 0.84
P04945 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04945 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
P04945 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
P04945 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
P04945 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04945 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.25■□□□□ 0.83
P04945 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.25■□□□□ 0.83
P04945 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04945 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P04945 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
P04945 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P04945 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04945 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.23■□□□□ 0.83
P04945 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.23■□□□□ 0.83
P04945 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04945 Particl-201ENSMUST00000205370 1560 ntBASIC20.22■□□□□ 0.83
P04945 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P04945 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P04945 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
P04945 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.21■□□□□ 0.83
P04945 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
P04945 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.21■□□□□ 0.83
P04945 Nkain2-201ENSMUST00000092602 558 ntBASIC20.21■□□□□ 0.83
P04945 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
P04945 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04945 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
P04945 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04945 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.2■□□□□ 0.82
P04945 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04945 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
P04945 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P04945 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04945 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04945 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04945 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
P04945 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P04945 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04945 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04945 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P04945 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04945 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04945 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04945 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P04945 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P04945 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04945 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04945 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04945 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04945 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04945 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.12■□□□□ 0.81
P04945 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
P04945 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04945 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04945 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04945 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04945 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms