Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21,88■■□□□ 1,09
Tgfb1P04202 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21,88■■□□□ 1,09
Tgfb1P04202 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21,88■■□□□ 1,09
Tgfb1P04202 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21,87■■□□□ 1,09
Tgfb1P04202 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21,87■■□□□ 1,09
Tgfb1P04202 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21,87■■□□□ 1,09
Tgfb1P04202 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21,87■■□□□ 1,09
Tgfb1P04202 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21,86■■□□□ 1,09
Tgfb1P04202 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21,85■■□□□ 1,09
Tgfb1P04202 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21,85■■□□□ 1,09
Tgfb1P04202 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21,85■■□□□ 1,09
Tgfb1P04202 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Tgfb1P04202 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21,84■■□□□ 1,09
Tgfb1P04202 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21,84■■□□□ 1,09
Tgfb1P04202 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
Tgfb1P04202 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
Tgfb1P04202 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
Tgfb1P04202 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21,83■■□□□ 1,09
Tgfb1P04202 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21,83■■□□□ 1,08
Tgfb1P04202 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21,82■■□□□ 1,08
Tgfb1P04202 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21,81■■□□□ 1,08
Tgfb1P04202 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21,81■■□□□ 1,08
Tgfb1P04202 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21,81■■□□□ 1,08
Tgfb1P04202 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,81■■□□□ 1,08
Tgfb1P04202 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21,81■■□□□ 1,08
Tgfb1P04202 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21,8■■□□□ 1,08
Tgfb1P04202 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21,8■■□□□ 1,08
Tgfb1P04202 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Tgfb1P04202 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Tgfb1P04202 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21,79■■□□□ 1,08
Tgfb1P04202 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Tgfb1P04202 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Tgfb1P04202 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21,79■■□□□ 1,08
Tgfb1P04202 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21,79■■□□□ 1,08
Tgfb1P04202 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Tgfb1P04202 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21,78■■□□□ 1,08
Tgfb1P04202 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Tgfb1P04202 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21,78■■□□□ 1,08
Tgfb1P04202 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21,77■■□□□ 1,08
Tgfb1P04202 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
Tgfb1P04202 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
Tgfb1P04202 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
Tgfb1P04202 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Tgfb1P04202 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21,75■■□□□ 1,07
Tgfb1P04202 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Tgfb1P04202 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21,74■■□□□ 1,07
Tgfb1P04202 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21,74■■□□□ 1,07
Tgfb1P04202 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21,74■■□□□ 1,07
Tgfb1P04202 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21,73■■□□□ 1,07
Tgfb1P04202 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21,73■■□□□ 1,07
Tgfb1P04202 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21,73■■□□□ 1,07
Tgfb1P04202 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21,72■■□□□ 1,07
Tgfb1P04202 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21,72■■□□□ 1,07
Tgfb1P04202 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21,72■■□□□ 1,07
Tgfb1P04202 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21,71■■□□□ 1,07
Tgfb1P04202 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21,71■■□□□ 1,07
Tgfb1P04202 Gm42809-201ENSMUST00000198429 1138 ntBASIC21,71■■□□□ 1,07
Tgfb1P04202 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21,71■■□□□ 1,07
Tgfb1P04202 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,07
Tgfb1P04202 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21,7■■□□□ 1,06
Tgfb1P04202 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21,7■■□□□ 1,06
Tgfb1P04202 Gm37847-201ENSMUST00000192163 1497 ntBASIC21,69■■□□□ 1,06
Tgfb1P04202 Gm31748-201ENSMUST00000194938 1497 ntBASIC21,69■■□□□ 1,06
Tgfb1P04202 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21,69■■□□□ 1,06
Tgfb1P04202 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21,68■■□□□ 1,06
Tgfb1P04202 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21,68■■□□□ 1,06
Tgfb1P04202 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21,67■■□□□ 1,06
Tgfb1P04202 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21,67■■□□□ 1,06
Tgfb1P04202 Nkain2-201ENSMUST00000092602 558 ntBASIC21,67■■□□□ 1,06
Tgfb1P04202 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
Tgfb1P04202 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21,66■■□□□ 1,06
Tgfb1P04202 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
Tgfb1P04202 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21,65■■□□□ 1,06
Tgfb1P04202 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Tgfb1P04202 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Tgfb1P04202 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Tgfb1P04202 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Tgfb1P04202 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21,64■■□□□ 1,05
Tgfb1P04202 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21,63■■□□□ 1,05
Tgfb1P04202 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21,63■■□□□ 1,05
Tgfb1P04202 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21,63■■□□□ 1,05
Tgfb1P04202 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21,62■■□□□ 1,05
Tgfb1P04202 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21,62■■□□□ 1,05
Tgfb1P04202 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21,62■■□□□ 1,05
Tgfb1P04202 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21,61■■□□□ 1,05
Tgfb1P04202 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21,61■■□□□ 1,05
Tgfb1P04202 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21,61■■□□□ 1,05
Tgfb1P04202 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21,61■■□□□ 1,05
Tgfb1P04202 Particl-201ENSMUST00000205370 1560 ntBASIC21,61■■□□□ 1,05
Tgfb1P04202 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21,6■■□□□ 1,05
Tgfb1P04202 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Tgfb1P04202 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21,6■■□□□ 1,05
Tgfb1P04202 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21,6■■□□□ 1,05
Tgfb1P04202 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21,6■■□□□ 1,05
Tgfb1P04202 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Tgfb1P04202 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Tgfb1P04202 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21,59■■□□□ 1,05
Tgfb1P04202 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21,59■■□□□ 1,05
Tgfb1P04202 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21,58■■□□□ 1,05
Tgfb1P04202 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21,58■■□□□ 1,05
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms