Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.51■■□□□ 1.03
P01852 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
P01852 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P01852 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01852 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P01852 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P01852 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P01852 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P01852 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P01852 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
P01852 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P01852 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
P01852 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
P01852 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
P01852 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P01852 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
P01852 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01852 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
P01852 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P01852 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.46■■□□□ 1.03
P01852 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
P01852 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
P01852 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01852 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01852 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.44■■□□□ 1.02
P01852 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01852 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01852 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01852 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
P01852 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
P01852 Gm7432-201ENSMUST00000210343 879 ntBASIC21.42■■□□□ 1.02
P01852 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P01852 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P01852 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P01852 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
P01852 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P01852 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
P01852 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.41■■□□□ 1.02
P01852 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
P01852 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P01852 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01852 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
P01852 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
P01852 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01852 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
P01852 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
P01852 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
P01852 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
P01852 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
P01852 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P01852 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
P01852 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.37■■□□□ 1.01
P01852 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
P01852 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
P01852 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.36■■□□□ 1.01
P01852 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
P01852 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P01852 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P01852 Particl-201ENSMUST00000205370 1560 ntBASIC21.35■■□□□ 1.01
P01852 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.34■■□□□ 1.01
P01852 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
P01852 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P01852 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P01852 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
P01852 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
P01852 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.33■■□□□ 1
P01852 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
P01852 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
P01852 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.32■■□□□ 1
P01852 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.32■■□□□ 1
P01852 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.32■■□□□ 1
P01852 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.32■■□□□ 1
P01852 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
P01852 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
P01852 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
P01852 Gm11599-201ENSMUST00000118720 878 ntBASIC21.31■■□□□ 1
P01852 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
P01852 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.3■■□□□ 1
P01852 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
P01852 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P01852 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
P01852 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
P01852 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01852 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P01852 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.27■■□□□ 1
P01852 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P01852 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P01852 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P01852 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P01852 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
P01852 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P01852 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
P01852 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01852 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P01852 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P01852 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P01852 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.22■□□□□ 0.99
P01852 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
P01852 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
P01852 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms