Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ifna1P01572 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.75■□□□□ 0.75
Ifna1P01572 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.74■□□□□ 0.75
Ifna1P01572 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ifna1P01572 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ifna1P01572 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.74■□□□□ 0.75
Ifna1P01572 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ifna1P01572 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ifna1P01572 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ifna1P01572 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ifna1P01572 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ifna1P01572 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ifna1P01572 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ifna1P01572 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ifna1P01572 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ifna1P01572 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ifna1P01572 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ifna1P01572 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ifna1P01572 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ifna1P01572 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Ifna1P01572 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ifna1P01572 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ifna1P01572 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ifna1P01572 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ifna1P01572 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ifna1P01572 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ifna1P01572 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ifna1P01572 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ifna1P01572 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ifna1P01572 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ifna1P01572 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ifna1P01572 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ifna1P01572 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.69■□□□□ 0.74
Ifna1P01572 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ifna1P01572 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ifna1P01572 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ifna1P01572 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ifna1P01572 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ifna1P01572 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ifna1P01572 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ifna1P01572 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.66■□□□□ 0.74
Ifna1P01572 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ifna1P01572 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ifna1P01572 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ifna1P01572 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ifna1P01572 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Ifna1P01572 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ifna1P01572 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ifna1P01572 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Ifna1P01572 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ifna1P01572 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ifna1P01572 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.63■□□□□ 0.73
Ifna1P01572 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna1P01572 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna1P01572 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna1P01572 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna1P01572 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna1P01572 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna1P01572 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna1P01572 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ifna1P01572 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ifna1P01572 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna1P01572 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna1P01572 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna1P01572 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ifna1P01572 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna1P01572 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ifna1P01572 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ifna1P01572 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ifna1P01572 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ifna1P01572 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ifna1P01572 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ifna1P01572 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ifna1P01572 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.59■□□□□ 0.73
Ifna1P01572 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ifna1P01572 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ifna1P01572 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ifna1P01572 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ifna1P01572 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ifna1P01572 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ifna1P01572 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ifna1P01572 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ifna1P01572 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.57■□□□□ 0.72
Ifna1P01572 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ifna1P01572 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Ifna1P01572 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ifna1P01572 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ifna1P01572 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ifna1P01572 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ifna1P01572 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ifna1P01572 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ifna1P01572 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ifna1P01572 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ifna1P01572 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ifna1P01572 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ifna1P01572 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ifna1P01572 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ifna1P01572 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ifna1P01572 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ifna1P01572 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms