Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Syn1O88935 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Syn1O88935 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Syn1O88935 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Syn1O88935 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Syn1O88935 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Syn1O88935 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
Syn1O88935 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Syn1O88935 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Syn1O88935 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Syn1O88935 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.74■■□□□ 1.55
Syn1O88935 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Syn1O88935 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.74■■□□□ 1.55
Syn1O88935 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Syn1O88935 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Syn1O88935 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Syn1O88935 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.73■■□□□ 1.55
Syn1O88935 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Syn1O88935 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.72■■□□□ 1.55
Syn1O88935 Gm14523-201ENSMUST00000117260 558 ntBASIC24.72■■□□□ 1.55
Syn1O88935 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Syn1O88935 Mir3960-201ENSMUST00000198213 73 ntBASIC24.71■■□□□ 1.55
Syn1O88935 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Syn1O88935 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Syn1O88935 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Syn1O88935 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Syn1O88935 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Syn1O88935 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Syn1O88935 Gm45364-201ENSMUST00000210883 159 ntBASIC24.67■■□□□ 1.54
Syn1O88935 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Syn1O88935 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.67■■□□□ 1.54
Syn1O88935 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.66■■□□□ 1.54
Syn1O88935 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Syn1O88935 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Syn1O88935 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Syn1O88935 Gm15546-201ENSMUST00000122095 826 ntBASIC24.65■■□□□ 1.54
Syn1O88935 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Syn1O88935 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Syn1O88935 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Syn1O88935 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Syn1O88935 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Syn1O88935 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Syn1O88935 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Syn1O88935 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Syn1O88935 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Syn1O88935 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Syn1O88935 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.62■■□□□ 1.53
Syn1O88935 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Syn1O88935 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Syn1O88935 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Syn1O88935 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Syn1O88935 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Syn1O88935 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Syn1O88935 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Syn1O88935 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Syn1O88935 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Syn1O88935 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.59■■□□□ 1.53
Syn1O88935 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Syn1O88935 Gm5921-201ENSMUST00000075898 882 ntBASIC24.58■■□□□ 1.53
Syn1O88935 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.57■■□□□ 1.52
Syn1O88935 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Syn1O88935 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Syn1O88935 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.57■■□□□ 1.52
Syn1O88935 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Syn1O88935 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.56■■□□□ 1.52
Syn1O88935 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Syn1O88935 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Syn1O88935 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Syn1O88935 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Syn1O88935 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Syn1O88935 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.54■■□□□ 1.52
Syn1O88935 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Syn1O88935 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Syn1O88935 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Syn1O88935 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Syn1O88935 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Syn1O88935 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Syn1O88935 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Syn1O88935 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Syn1O88935 Gm10420-201ENSMUST00000121713 882 ntBASIC24.5■■□□□ 1.51
Syn1O88935 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Syn1O88935 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.49■■□□□ 1.51
Syn1O88935 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Syn1O88935 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.48■■□□□ 1.51
Syn1O88935 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.48■■□□□ 1.51
Syn1O88935 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Syn1O88935 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Syn1O88935 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.47■■□□□ 1.51
Syn1O88935 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Syn1O88935 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.46■■□□□ 1.51
Syn1O88935 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Syn1O88935 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Syn1O88935 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Syn1O88935 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.45■■□□□ 1.5
Syn1O88935 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Syn1O88935 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.45■■□□□ 1.5
Syn1O88935 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Syn1O88935 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Syn1O88935 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Syn1O88935 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms