Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Hcn1O88704 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hcn1O88704 Nkain2-201ENSMUST00000092602 558 ntBASIC22.36■■□□□ 1.17
Hcn1O88704 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hcn1O88704 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hcn1O88704 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Hcn1O88704 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hcn1O88704 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Hcn1O88704 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hcn1O88704 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hcn1O88704 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hcn1O88704 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hcn1O88704 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hcn1O88704 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.33■■□□□ 1.17
Hcn1O88704 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Hcn1O88704 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Hcn1O88704 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hcn1O88704 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.32■■□□□ 1.16
Hcn1O88704 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hcn1O88704 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Hcn1O88704 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Hcn1O88704 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Hcn1O88704 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hcn1O88704 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Hcn1O88704 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hcn1O88704 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hcn1O88704 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hcn1O88704 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hcn1O88704 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hcn1O88704 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hcn1O88704 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.28■■□□□ 1.16
Hcn1O88704 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hcn1O88704 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hcn1O88704 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hcn1O88704 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Hcn1O88704 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hcn1O88704 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Hcn1O88704 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.26■■□□□ 1.15
Hcn1O88704 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hcn1O88704 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hcn1O88704 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.24■■□□□ 1.15
Hcn1O88704 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
Hcn1O88704 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hcn1O88704 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hcn1O88704 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.22■■□□□ 1.15
Hcn1O88704 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hcn1O88704 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hcn1O88704 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Hcn1O88704 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hcn1O88704 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hcn1O88704 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hcn1O88704 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hcn1O88704 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hcn1O88704 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Hcn1O88704 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hcn1O88704 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.19■■□□□ 1.14
Hcn1O88704 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.19■■□□□ 1.14
Hcn1O88704 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Hcn1O88704 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hcn1O88704 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hcn1O88704 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hcn1O88704 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Hcn1O88704 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.17■■□□□ 1.14
Hcn1O88704 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Hcn1O88704 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hcn1O88704 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hcn1O88704 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hcn1O88704 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Hcn1O88704 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hcn1O88704 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.15■■□□□ 1.14
Hcn1O88704 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hcn1O88704 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hcn1O88704 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Hcn1O88704 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hcn1O88704 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Hcn1O88704 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Hcn1O88704 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hcn1O88704 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hcn1O88704 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hcn1O88704 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hcn1O88704 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hcn1O88704 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hcn1O88704 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Hcn1O88704 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.11■■□□□ 1.13
Hcn1O88704 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Hcn1O88704 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.11■■□□□ 1.13
Hcn1O88704 Gm30023-201ENSMUST00000197970 889 ntBASIC22.11■■□□□ 1.13
Hcn1O88704 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hcn1O88704 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Hcn1O88704 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hcn1O88704 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hcn1O88704 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Hcn1O88704 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Hcn1O88704 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hcn1O88704 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.07■■□□□ 1.12
Hcn1O88704 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hcn1O88704 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hcn1O88704 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Hcn1O88704 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hcn1O88704 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms