Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tulp3O88413 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.9■■□□□ 1.1
Tulp3O88413 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Tulp3O88413 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tulp3O88413 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tulp3O88413 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Tulp3O88413 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tulp3O88413 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Tulp3O88413 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.88■■□□□ 1.09
Tulp3O88413 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.86■■□□□ 1.09
Tulp3O88413 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tulp3O88413 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tulp3O88413 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tulp3O88413 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tulp3O88413 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tulp3O88413 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tulp3O88413 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Tulp3O88413 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tulp3O88413 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tulp3O88413 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tulp3O88413 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tulp3O88413 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tulp3O88413 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tulp3O88413 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Tulp3O88413 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tulp3O88413 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Tulp3O88413 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tulp3O88413 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tulp3O88413 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tulp3O88413 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tulp3O88413 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tulp3O88413 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tulp3O88413 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.8■■□□□ 1.08
Tulp3O88413 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tulp3O88413 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tulp3O88413 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tulp3O88413 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tulp3O88413 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tulp3O88413 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Tulp3O88413 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tulp3O88413 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tulp3O88413 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Tulp3O88413 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tulp3O88413 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tulp3O88413 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tulp3O88413 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tulp3O88413 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tulp3O88413 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tulp3O88413 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tulp3O88413 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Tulp3O88413 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tulp3O88413 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tulp3O88413 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Tulp3O88413 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tulp3O88413 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tulp3O88413 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.76■■□□□ 1.07
Tulp3O88413 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tulp3O88413 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tulp3O88413 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tulp3O88413 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tulp3O88413 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Tulp3O88413 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tulp3O88413 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tulp3O88413 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Tulp3O88413 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Tulp3O88413 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tulp3O88413 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Tulp3O88413 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tulp3O88413 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.74■■□□□ 1.07
Tulp3O88413 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tulp3O88413 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tulp3O88413 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tulp3O88413 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.73■■□□□ 1.07
Tulp3O88413 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tulp3O88413 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tulp3O88413 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tulp3O88413 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.72■■□□□ 1.07
Tulp3O88413 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.72■■□□□ 1.07
Tulp3O88413 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tulp3O88413 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tulp3O88413 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tulp3O88413 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tulp3O88413 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Tulp3O88413 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tulp3O88413 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tulp3O88413 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tulp3O88413 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tulp3O88413 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tulp3O88413 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tulp3O88413 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tulp3O88413 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Tulp3O88413 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.68■■□□□ 1.06
Tulp3O88413 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tulp3O88413 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tulp3O88413 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tulp3O88413 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tulp3O88413 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tulp3O88413 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tulp3O88413 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tulp3O88413 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms