Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sigmar1O55242 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sigmar1O55242 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sigmar1O55242 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sigmar1O55242 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sigmar1O55242 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sigmar1O55242 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sigmar1O55242 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sigmar1O55242 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sigmar1O55242 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sigmar1O55242 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sigmar1O55242 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sigmar1O55242 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.25■□□□□ 0.19
Sigmar1O55242 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sigmar1O55242 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sigmar1O55242 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sigmar1O55242 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.24■□□□□ 0.19
Sigmar1O55242 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sigmar1O55242 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sigmar1O55242 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sigmar1O55242 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sigmar1O55242 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sigmar1O55242 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sigmar1O55242 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sigmar1O55242 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sigmar1O55242 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sigmar1O55242 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sigmar1O55242 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sigmar1O55242 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sigmar1O55242 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Sigmar1O55242 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sigmar1O55242 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Sigmar1O55242 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sigmar1O55242 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sigmar1O55242 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sigmar1O55242 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sigmar1O55242 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sigmar1O55242 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.19■□□□□ 0.18
Sigmar1O55242 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.19■□□□□ 0.18
Sigmar1O55242 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sigmar1O55242 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sigmar1O55242 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sigmar1O55242 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sigmar1O55242 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sigmar1O55242 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.17■□□□□ 0.18
Sigmar1O55242 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sigmar1O55242 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Sigmar1O55242 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sigmar1O55242 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sigmar1O55242 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sigmar1O55242 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sigmar1O55242 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Sigmar1O55242 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sigmar1O55242 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sigmar1O55242 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sigmar1O55242 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.15■□□□□ 0.18
Sigmar1O55242 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sigmar1O55242 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sigmar1O55242 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sigmar1O55242 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sigmar1O55242 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sigmar1O55242 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.13■□□□□ 0.17
Sigmar1O55242 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sigmar1O55242 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.12■□□□□ 0.17
Sigmar1O55242 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sigmar1O55242 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sigmar1O55242 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sigmar1O55242 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.11■□□□□ 0.17
Sigmar1O55242 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sigmar1O55242 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sigmar1O55242 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sigmar1O55242 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Sigmar1O55242 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sigmar1O55242 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Sigmar1O55242 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.11■□□□□ 0.17
Sigmar1O55242 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sigmar1O55242 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sigmar1O55242 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sigmar1O55242 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sigmar1O55242 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.1■□□□□ 0.17
Sigmar1O55242 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sigmar1O55242 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sigmar1O55242 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sigmar1O55242 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sigmar1O55242 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sigmar1O55242 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Sigmar1O55242 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sigmar1O55242 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sigmar1O55242 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sigmar1O55242 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sigmar1O55242 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Sigmar1O55242 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.07■□□□□ 0.16
Sigmar1O55242 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms