Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rdh5O55240 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.32■■□□□ 1.16
Rdh5O55240 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rdh5O55240 Gm8503-201ENSMUST00000118131 455 ntBASIC22.31■■□□□ 1.16
Rdh5O55240 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rdh5O55240 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.31■■□□□ 1.16
Rdh5O55240 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rdh5O55240 Gm6821-201ENSMUST00000107540 542 ntBASIC22.3■■□□□ 1.16
Rdh5O55240 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
Rdh5O55240 Nkain2-201ENSMUST00000092602 558 ntBASIC22.3■■□□□ 1.16
Rdh5O55240 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rdh5O55240 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rdh5O55240 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.3■■□□□ 1.16
Rdh5O55240 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rdh5O55240 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Rdh5O55240 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rdh5O55240 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh5O55240 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Rdh5O55240 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.28■■□□□ 1.16
Rdh5O55240 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh5O55240 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rdh5O55240 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rdh5O55240 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rdh5O55240 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rdh5O55240 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.26■■□□□ 1.15
Rdh5O55240 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.26■■□□□ 1.15
Rdh5O55240 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Rdh5O55240 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.25■■□□□ 1.15
Rdh5O55240 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rdh5O55240 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rdh5O55240 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rdh5O55240 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rdh5O55240 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rdh5O55240 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rdh5O55240 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.23■■□□□ 1.15
Rdh5O55240 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.23■■□□□ 1.15
Rdh5O55240 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
Rdh5O55240 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rdh5O55240 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rdh5O55240 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.22■■□□□ 1.15
Rdh5O55240 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.22■■□□□ 1.15
Rdh5O55240 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Rdh5O55240 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rdh5O55240 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.2■■□□□ 1.14
Rdh5O55240 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rdh5O55240 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rdh5O55240 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rdh5O55240 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rdh5O55240 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.19■■□□□ 1.14
Rdh5O55240 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rdh5O55240 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rdh5O55240 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh5O55240 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
Rdh5O55240 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rdh5O55240 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rdh5O55240 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Rdh5O55240 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rdh5O55240 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Rdh5O55240 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.16■■□□□ 1.14
Rdh5O55240 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.15■■□□□ 1.14
Rdh5O55240 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rdh5O55240 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rdh5O55240 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rdh5O55240 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.13■■□□□ 1.13
Rdh5O55240 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.13■■□□□ 1.13
Rdh5O55240 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rdh5O55240 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rdh5O55240 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rdh5O55240 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rdh5O55240 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.1■■□□□ 1.13
Rdh5O55240 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.1■■□□□ 1.13
Rdh5O55240 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.1■■□□□ 1.13
Rdh5O55240 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.09■■□□□ 1.13
Rdh5O55240 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rdh5O55240 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rdh5O55240 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.08■■□□□ 1.13
Rdh5O55240 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.08■■□□□ 1.13
Rdh5O55240 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.08■■□□□ 1.13
Rdh5O55240 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Rdh5O55240 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rdh5O55240 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rdh5O55240 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Rdh5O55240 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rdh5O55240 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rdh5O55240 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rdh5O55240 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Rdh5O55240 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh5O55240 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.05■■□□□ 1.12
Rdh5O55240 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh5O55240 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh5O55240 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh5O55240 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh5O55240 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rdh5O55240 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Rdh5O55240 Particl-201ENSMUST00000205370 1560 ntBASIC22.04■■□□□ 1.12
Rdh5O55240 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rdh5O55240 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rdh5O55240 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rdh5O55240 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Rdh5O55240 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms