Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Pcdh12O55134 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh12O55134 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh12O55134 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh12O55134 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh12O55134 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.27■□□□□ 0.99
Pcdh12O55134 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh12O55134 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh12O55134 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh12O55134 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdh12O55134 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh12O55134 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdh12O55134 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdh12O55134 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh12O55134 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh12O55134 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh12O55134 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh12O55134 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdh12O55134 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdh12O55134 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh12O55134 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.23■□□□□ 0.99
Pcdh12O55134 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh12O55134 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh12O55134 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh12O55134 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh12O55134 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh12O55134 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh12O55134 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh12O55134 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh12O55134 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh12O55134 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh12O55134 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh12O55134 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh12O55134 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdh12O55134 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh12O55134 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdh12O55134 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh12O55134 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh12O55134 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh12O55134 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.16■□□□□ 0.98
Pcdh12O55134 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh12O55134 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdh12O55134 Gm30023-201ENSMUST00000197970 889 ntBASIC21.15■□□□□ 0.98
Pcdh12O55134 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh12O55134 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh12O55134 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh12O55134 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh12O55134 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Pcdh12O55134 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh12O55134 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh12O55134 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh12O55134 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Pcdh12O55134 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdh12O55134 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pcdh12O55134 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh12O55134 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh12O55134 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh12O55134 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh12O55134 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh12O55134 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh12O55134 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdh12O55134 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh12O55134 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh12O55134 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdh12O55134 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh12O55134 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh12O55134 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.08■□□□□ 0.97
Pcdh12O55134 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh12O55134 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh12O55134 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh12O55134 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdh12O55134 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh12O55134 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdh12O55134 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.06■□□□□ 0.96
Pcdh12O55134 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh12O55134 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdh12O55134 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh12O55134 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh12O55134 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcdh12O55134 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh12O55134 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh12O55134 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh12O55134 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh12O55134 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh12O55134 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh12O55134 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdh12O55134 Gm7432-201ENSMUST00000210343 879 ntBASIC21.02■□□□□ 0.96
Pcdh12O55134 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdh12O55134 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pcdh12O55134 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh12O55134 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh12O55134 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh12O55134 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh12O55134 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh12O55134 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Pcdh12O55134 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh12O55134 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh12O55134 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh12O55134 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh12O55134 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms