Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.18■□□□□ 0.82
Cxcl13O55038 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cxcl13O55038 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cxcl13O55038 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cxcl13O55038 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cxcl13O55038 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cxcl13O55038 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cxcl13O55038 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cxcl13O55038 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cxcl13O55038 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cxcl13O55038 Gm6311-201ENSMUST00000073790 878 ntBASIC20.15■□□□□ 0.82
Cxcl13O55038 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cxcl13O55038 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Cxcl13O55038 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Cxcl13O55038 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cxcl13O55038 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cxcl13O55038 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cxcl13O55038 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cxcl13O55038 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cxcl13O55038 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl13O55038 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cxcl13O55038 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cxcl13O55038 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl13O55038 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl13O55038 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.09■□□□□ 0.81
Cxcl13O55038 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl13O55038 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cxcl13O55038 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cxcl13O55038 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.07■□□□□ 0.8
Cxcl13O55038 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.07■□□□□ 0.8
Cxcl13O55038 Gm37136-201ENSMUST00000194368 194 ntBASIC20.07■□□□□ 0.8
Cxcl13O55038 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.07■□□□□ 0.8
Cxcl13O55038 Amer2-203ENSMUST00000225247 2662 ntBASIC20.07■□□□□ 0.8
Cxcl13O55038 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl13O55038 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cxcl13O55038 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Cxcl13O55038 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl13O55038 Gm11175-201ENSMUST00000116172 543 ntBASIC20.05■□□□□ 0.8
Cxcl13O55038 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.05■□□□□ 0.8
Cxcl13O55038 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Cxcl13O55038 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl13O55038 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl13O55038 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cxcl13O55038 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cxcl13O55038 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl13O55038 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.04■□□□□ 0.8
Cxcl13O55038 Mir6538-201ENSMUST00000183713 110 ntBASIC20.04■□□□□ 0.8
Cxcl13O55038 Gm4799-201ENSMUST00000095396 657 ntBASIC20.04■□□□□ 0.8
Cxcl13O55038 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl13O55038 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.04■□□□□ 0.8
Cxcl13O55038 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cxcl13O55038 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl13O55038 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Cxcl13O55038 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl13O55038 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cxcl13O55038 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl13O55038 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.02■□□□□ 0.8
Cxcl13O55038 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl13O55038 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cxcl13O55038 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl13O55038 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl13O55038 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl13O55038 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl13O55038 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl13O55038 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl13O55038 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl13O55038 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cxcl13O55038 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cxcl13O55038 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcl13O55038 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcl13O55038 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.98■□□□□ 0.79
Cxcl13O55038 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.98■□□□□ 0.79
Cxcl13O55038 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cxcl13O55038 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcl13O55038 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcl13O55038 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl13O55038 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl13O55038 Mir3960-201ENSMUST00000198213 73 ntBASIC19.96■□□□□ 0.79
Cxcl13O55038 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl13O55038 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.95■□□□□ 0.78
Cxcl13O55038 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl13O55038 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl13O55038 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
Cxcl13O55038 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Cxcl13O55038 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.92■□□□□ 0.78
Cxcl13O55038 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cxcl13O55038 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl13O55038 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
Cxcl13O55038 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl13O55038 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl13O55038 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.91■□□□□ 0.78
Cxcl13O55038 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl13O55038 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl13O55038 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl13O55038 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl13O55038 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl13O55038 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl13O55038 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl13O55038 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl13O55038 Gm45364-201ENSMUST00000210883 159 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms