Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf13O54965 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf13O54965 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf13O54965 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf13O54965 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rnf13O54965 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf13O54965 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf13O54965 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf13O54965 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf13O54965 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf13O54965 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.21■□□□□ 0.99
Rnf13O54965 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf13O54965 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf13O54965 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rnf13O54965 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf13O54965 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf13O54965 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rnf13O54965 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.18■□□□□ 0.98
Rnf13O54965 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.18■□□□□ 0.98
Rnf13O54965 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf13O54965 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf13O54965 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf13O54965 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf13O54965 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf13O54965 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf13O54965 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf13O54965 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf13O54965 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.16■□□□□ 0.98
Rnf13O54965 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf13O54965 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf13O54965 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf13O54965 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf13O54965 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf13O54965 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf13O54965 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf13O54965 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Rnf13O54965 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf13O54965 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf13O54965 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rnf13O54965 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf13O54965 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rnf13O54965 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf13O54965 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.13■□□□□ 0.97
Rnf13O54965 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf13O54965 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.12■□□□□ 0.97
Rnf13O54965 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf13O54965 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf13O54965 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf13O54965 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf13O54965 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf13O54965 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Rnf13O54965 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.11■□□□□ 0.97
Rnf13O54965 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf13O54965 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rnf13O54965 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf13O54965 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf13O54965 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf13O54965 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rnf13O54965 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf13O54965 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf13O54965 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf13O54965 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf13O54965 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.09■□□□□ 0.97
Rnf13O54965 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf13O54965 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf13O54965 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf13O54965 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rnf13O54965 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf13O54965 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf13O54965 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf13O54965 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf13O54965 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf13O54965 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf13O54965 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf13O54965 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.07■□□□□ 0.96
Rnf13O54965 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Rnf13O54965 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.06■□□□□ 0.96
Rnf13O54965 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf13O54965 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.05■□□□□ 0.96
Rnf13O54965 Zfp131-205ENSMUST00000223812 663 ntBASIC21.05■□□□□ 0.96
Rnf13O54965 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf13O54965 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf13O54965 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Rnf13O54965 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf13O54965 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.03■□□□□ 0.96
Rnf13O54965 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf13O54965 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf13O54965 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf13O54965 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf13O54965 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf13O54965 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf13O54965 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.02■□□□□ 0.96
Rnf13O54965 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf13O54965 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf13O54965 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf13O54965 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.01■□□□□ 0.95
Rnf13O54965 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf13O54965 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Rnf13O54965 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf13O54965 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms