Protein–RNA interactions for Protein: O54774

Ap3d1, AP-3 complex subunit delta-1, mousemouse

Predictions only

Length 1,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3d1O54774 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ap3d1O54774 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ap3d1O54774 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ap3d1O54774 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.12■■□□□ 1.45
Ap3d1O54774 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
Ap3d1O54774 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ap3d1O54774 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.11■■□□□ 1.45
Ap3d1O54774 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ap3d1O54774 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ap3d1O54774 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ap3d1O54774 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ap3d1O54774 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.1■■□□□ 1.45
Ap3d1O54774 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.08■■□□□ 1.45
Ap3d1O54774 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Ap3d1O54774 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.08■■□□□ 1.45
Ap3d1O54774 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ap3d1O54774 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ap3d1O54774 Gm7432-201ENSMUST00000210343 879 ntBASIC24.06■■□□□ 1.44
Ap3d1O54774 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ap3d1O54774 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Ap3d1O54774 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ap3d1O54774 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ap3d1O54774 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ap3d1O54774 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Ap3d1O54774 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.04■■□□□ 1.44
Ap3d1O54774 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ap3d1O54774 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.03■■□□□ 1.44
Ap3d1O54774 Particl-201ENSMUST00000205370 1560 ntBASIC24.03■■□□□ 1.44
Ap3d1O54774 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ap3d1O54774 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.01■■□□□ 1.43
Ap3d1O54774 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Ap3d1O54774 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ap3d1O54774 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ap3d1O54774 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ap3d1O54774 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ap3d1O54774 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ap3d1O54774 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.99■■□□□ 1.43
Ap3d1O54774 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.99■■□□□ 1.43
Ap3d1O54774 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ap3d1O54774 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ap3d1O54774 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.98■■□□□ 1.43
Ap3d1O54774 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ap3d1O54774 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.98■■□□□ 1.43
Ap3d1O54774 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.96■■□□□ 1.43
Ap3d1O54774 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.96■■□□□ 1.43
Ap3d1O54774 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ap3d1O54774 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ap3d1O54774 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
Ap3d1O54774 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.95■■□□□ 1.42
Ap3d1O54774 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.95■■□□□ 1.42
Ap3d1O54774 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ap3d1O54774 Gm11599-201ENSMUST00000118720 878 ntBASIC23.94■■□□□ 1.42
Ap3d1O54774 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Ap3d1O54774 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ap3d1O54774 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Ap3d1O54774 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ap3d1O54774 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ap3d1O54774 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Ap3d1O54774 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ap3d1O54774 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ap3d1O54774 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ap3d1O54774 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ap3d1O54774 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Ap3d1O54774 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ap3d1O54774 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ap3d1O54774 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ap3d1O54774 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ap3d1O54774 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ap3d1O54774 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ap3d1O54774 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ap3d1O54774 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ap3d1O54774 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Ap3d1O54774 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ap3d1O54774 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ap3d1O54774 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ap3d1O54774 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.81■■□□□ 1.4
Ap3d1O54774 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ap3d1O54774 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ap3d1O54774 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ap3d1O54774 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ap3d1O54774 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ap3d1O54774 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ap3d1O54774 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ap3d1O54774 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.79■■□□□ 1.4
Ap3d1O54774 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.79■■□□□ 1.4
Ap3d1O54774 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ap3d1O54774 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.78■■□□□ 1.4
Ap3d1O54774 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.78■■□□□ 1.4
Ap3d1O54774 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.78■■□□□ 1.4
Ap3d1O54774 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ap3d1O54774 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ap3d1O54774 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ap3d1O54774 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ap3d1O54774 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ap3d1O54774 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ap3d1O54774 Gm37136-201ENSMUST00000194368 194 ntBASIC23.76■■□□□ 1.39
Ap3d1O54774 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ap3d1O54774 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ap3d1O54774 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ap3d1O54774 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 547.9 ms