Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tnfrsf11bO08712 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tnfrsf11bO08712 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tnfrsf11bO08712 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Tnfrsf11bO08712 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Tnfrsf11bO08712 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.95■■□□□ 1.43
Tnfrsf11bO08712 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tnfrsf11bO08712 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tnfrsf11bO08712 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tnfrsf11bO08712 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tnfrsf11bO08712 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tnfrsf11bO08712 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Tnfrsf11bO08712 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tnfrsf11bO08712 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tnfrsf11bO08712 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Tnfrsf11bO08712 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tnfrsf11bO08712 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tnfrsf11bO08712 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tnfrsf11bO08712 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Tnfrsf11bO08712 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tnfrsf11bO08712 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Tnfrsf11bO08712 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.9■■□□□ 1.42
Tnfrsf11bO08712 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tnfrsf11bO08712 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tnfrsf11bO08712 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Tnfrsf11bO08712 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.88■■□□□ 1.41
Tnfrsf11bO08712 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tnfrsf11bO08712 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tnfrsf11bO08712 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Tnfrsf11bO08712 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tnfrsf11bO08712 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Tnfrsf11bO08712 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Tnfrsf11bO08712 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tnfrsf11bO08712 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tnfrsf11bO08712 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tnfrsf11bO08712 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tnfrsf11bO08712 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tnfrsf11bO08712 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Tnfrsf11bO08712 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tnfrsf11bO08712 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tnfrsf11bO08712 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Tnfrsf11bO08712 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.82■■□□□ 1.4
Tnfrsf11bO08712 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.81■■□□□ 1.4
Tnfrsf11bO08712 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.81■■□□□ 1.4
Tnfrsf11bO08712 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tnfrsf11bO08712 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tnfrsf11bO08712 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tnfrsf11bO08712 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Tnfrsf11bO08712 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tnfrsf11bO08712 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Tnfrsf11bO08712 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Tnfrsf11bO08712 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tnfrsf11bO08712 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tnfrsf11bO08712 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tnfrsf11bO08712 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tnfrsf11bO08712 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tnfrsf11bO08712 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tnfrsf11bO08712 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tnfrsf11bO08712 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tnfrsf11bO08712 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.75■■□□□ 1.39
Tnfrsf11bO08712 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tnfrsf11bO08712 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Tnfrsf11bO08712 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tnfrsf11bO08712 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tnfrsf11bO08712 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tnfrsf11bO08712 Particl-201ENSMUST00000205370 1560 ntBASIC23.74■■□□□ 1.39
Tnfrsf11bO08712 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tnfrsf11bO08712 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tnfrsf11bO08712 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tnfrsf11bO08712 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tnfrsf11bO08712 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tnfrsf11bO08712 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tnfrsf11bO08712 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.71■■□□□ 1.39
Tnfrsf11bO08712 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tnfrsf11bO08712 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tnfrsf11bO08712 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
Tnfrsf11bO08712 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Tnfrsf11bO08712 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tnfrsf11bO08712 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Tnfrsf11bO08712 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tnfrsf11bO08712 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Tnfrsf11bO08712 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Tnfrsf11bO08712 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tnfrsf11bO08712 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
Tnfrsf11bO08712 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tnfrsf11bO08712 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Tnfrsf11bO08712 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tnfrsf11bO08712 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tnfrsf11bO08712 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Tnfrsf11bO08712 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tnfrsf11bO08712 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tnfrsf11bO08712 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Tnfrsf11bO08712 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms