Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Raet1bO08603 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Raet1bO08603 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Raet1bO08603 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Raet1bO08603 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Raet1bO08603 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Raet1bO08603 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Raet1bO08603 Nkain2-201ENSMUST00000092602 558 ntBASIC20.89■□□□□ 0.93
Raet1bO08603 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Raet1bO08603 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Raet1bO08603 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Raet1bO08603 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Raet1bO08603 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.87■□□□□ 0.93
Raet1bO08603 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Raet1bO08603 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.87■□□□□ 0.93
Raet1bO08603 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Raet1bO08603 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.86■□□□□ 0.93
Raet1bO08603 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Raet1bO08603 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Raet1bO08603 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.85■□□□□ 0.93
Raet1bO08603 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Raet1bO08603 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.85■□□□□ 0.93
Raet1bO08603 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Raet1bO08603 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Raet1bO08603 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.84■□□□□ 0.93
Raet1bO08603 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Raet1bO08603 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Raet1bO08603 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Raet1bO08603 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Raet1bO08603 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Raet1bO08603 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Raet1bO08603 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.82■□□□□ 0.92
Raet1bO08603 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.82■□□□□ 0.92
Raet1bO08603 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Raet1bO08603 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Raet1bO08603 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Raet1bO08603 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.8■□□□□ 0.92
Raet1bO08603 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.8■□□□□ 0.92
Raet1bO08603 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Raet1bO08603 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raet1bO08603 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Raet1bO08603 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raet1bO08603 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.79■□□□□ 0.92
Raet1bO08603 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Raet1bO08603 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Raet1bO08603 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Raet1bO08603 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Raet1bO08603 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Raet1bO08603 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Raet1bO08603 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Raet1bO08603 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Raet1bO08603 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.77■□□□□ 0.92
Raet1bO08603 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Raet1bO08603 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Raet1bO08603 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.75■□□□□ 0.91
Raet1bO08603 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Raet1bO08603 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Raet1bO08603 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Raet1bO08603 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.74■□□□□ 0.91
Raet1bO08603 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.74■□□□□ 0.91
Raet1bO08603 Gm6821-201ENSMUST00000107540 542 ntBASIC20.73■□□□□ 0.91
Raet1bO08603 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Raet1bO08603 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Raet1bO08603 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Raet1bO08603 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.72■□□□□ 0.91
Raet1bO08603 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Raet1bO08603 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Raet1bO08603 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Raet1bO08603 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Raet1bO08603 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Raet1bO08603 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Raet1bO08603 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Raet1bO08603 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.71■□□□□ 0.91
Raet1bO08603 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Raet1bO08603 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.7■□□□□ 0.9
Raet1bO08603 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Raet1bO08603 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Raet1bO08603 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Raet1bO08603 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Raet1bO08603 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.69■□□□□ 0.9
Raet1bO08603 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.69■□□□□ 0.9
Raet1bO08603 Particl-201ENSMUST00000205370 1560 ntBASIC20.68■□□□□ 0.9
Raet1bO08603 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Raet1bO08603 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Raet1bO08603 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Raet1bO08603 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Raet1bO08603 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raet1bO08603 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raet1bO08603 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Raet1bO08603 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Raet1bO08603 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raet1bO08603 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Raet1bO08603 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Raet1bO08603 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Raet1bO08603 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Raet1bO08603 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.63■□□□□ 0.89
Raet1bO08603 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Raet1bO08603 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.62■□□□□ 0.89
Raet1bO08603 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Raet1bO08603 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms