Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpsf4lE9Q2N0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.08■□□□□ 0.81
Cpsf4lE9Q2N0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf4lE9Q2N0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf4lE9Q2N0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf4lE9Q2N0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cpsf4lE9Q2N0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf4lE9Q2N0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf4lE9Q2N0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf4lE9Q2N0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf4lE9Q2N0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.05■□□□□ 0.8
Cpsf4lE9Q2N0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf4lE9Q2N0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf4lE9Q2N0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf4lE9Q2N0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf4lE9Q2N0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf4lE9Q2N0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf4lE9Q2N0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cpsf4lE9Q2N0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf4lE9Q2N0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf4lE9Q2N0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.03■□□□□ 0.8
Cpsf4lE9Q2N0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf4lE9Q2N0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cpsf4lE9Q2N0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cpsf4lE9Q2N0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpsf4lE9Q2N0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf4lE9Q2N0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf4lE9Q2N0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.01■□□□□ 0.79
Cpsf4lE9Q2N0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.01■□□□□ 0.79
Cpsf4lE9Q2N0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf4lE9Q2N0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf4lE9Q2N0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf4lE9Q2N0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf4lE9Q2N0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf4lE9Q2N0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf4lE9Q2N0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf4lE9Q2N0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf4lE9Q2N0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf4lE9Q2N0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf4lE9Q2N0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cpsf4lE9Q2N0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cpsf4lE9Q2N0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf4lE9Q2N0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4lE9Q2N0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4lE9Q2N0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4lE9Q2N0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4lE9Q2N0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4lE9Q2N0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cpsf4lE9Q2N0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4lE9Q2N0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cpsf4lE9Q2N0 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.92■□□□□ 0.78
Cpsf4lE9Q2N0 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.92■□□□□ 0.78
Cpsf4lE9Q2N0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.92■□□□□ 0.78
Cpsf4lE9Q2N0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4lE9Q2N0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cpsf4lE9Q2N0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4lE9Q2N0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4lE9Q2N0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4lE9Q2N0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.9■□□□□ 0.78
Cpsf4lE9Q2N0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4lE9Q2N0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4lE9Q2N0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cpsf4lE9Q2N0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cpsf4lE9Q2N0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cpsf4lE9Q2N0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf4lE9Q2N0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf4lE9Q2N0 Particl-201ENSMUST00000205370 1560 ntBASIC19.89■□□□□ 0.77
Cpsf4lE9Q2N0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cpsf4lE9Q2N0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cpsf4lE9Q2N0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cpsf4lE9Q2N0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf4lE9Q2N0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4lE9Q2N0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4lE9Q2N0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4lE9Q2N0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cpsf4lE9Q2N0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4lE9Q2N0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.87■□□□□ 0.77
Cpsf4lE9Q2N0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Cpsf4lE9Q2N0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4lE9Q2N0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf4lE9Q2N0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.86■□□□□ 0.77
Cpsf4lE9Q2N0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf4lE9Q2N0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cpsf4lE9Q2N0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.83■□□□□ 0.77
Cpsf4lE9Q2N0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
Cpsf4lE9Q2N0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.83■□□□□ 0.77
Cpsf4lE9Q2N0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf4lE9Q2N0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf4lE9Q2N0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.82■□□□□ 0.76
Cpsf4lE9Q2N0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf4lE9Q2N0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cpsf4lE9Q2N0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Cpsf4lE9Q2N0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4lE9Q2N0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4lE9Q2N0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cpsf4lE9Q2N0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.81■□□□□ 0.76
Cpsf4lE9Q2N0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4lE9Q2N0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf4lE9Q2N0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.8■□□□□ 0.76
Cpsf4lE9Q2N0 Gm37136-201ENSMUST00000194368 194 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms