Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm9806-201ENSMUST00000051080 552 ntBASIC21.46■■□□□ 1.03
Dchs1E9PVD3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dchs1E9PVD3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Dchs1E9PVD3 Scarna2-201ENSMUST00000157560 414 ntBASIC21.45■■□□□ 1.02
Dchs1E9PVD3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Dchs1E9PVD3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.44■■□□□ 1.02
Dchs1E9PVD3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dchs1E9PVD3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dchs1E9PVD3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.43■■□□□ 1.02
Dchs1E9PVD3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Dchs1E9PVD3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dchs1E9PVD3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Dchs1E9PVD3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
Dchs1E9PVD3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dchs1E9PVD3 Gm11687-201ENSMUST00000118911 886 ntBASIC21.41■■□□□ 1.02
Dchs1E9PVD3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.41■■□□□ 1.02
Dchs1E9PVD3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Dchs1E9PVD3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Dchs1E9PVD3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dchs1E9PVD3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dchs1E9PVD3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dchs1E9PVD3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Dchs1E9PVD3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Dchs1E9PVD3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dchs1E9PVD3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.38■■□□□ 1.01
Dchs1E9PVD3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Dchs1E9PVD3 Gm16437-201ENSMUST00000025669 507 ntBASIC21.38■■□□□ 1.01
Dchs1E9PVD3 Particl-201ENSMUST00000205370 1560 ntBASIC21.38■■□□□ 1.01
Dchs1E9PVD3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dchs1E9PVD3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.35■■□□□ 1.01
Dchs1E9PVD3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dchs1E9PVD3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dchs1E9PVD3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.33■■□□□ 1
Dchs1E9PVD3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.32■■□□□ 1
Dchs1E9PVD3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dchs1E9PVD3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dchs1E9PVD3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Dchs1E9PVD3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.31■■□□□ 1
Dchs1E9PVD3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.31■■□□□ 1
Dchs1E9PVD3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dchs1E9PVD3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Dchs1E9PVD3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.31■■□□□ 1
Dchs1E9PVD3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.3■■□□□ 1
Dchs1E9PVD3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.3■■□□□ 1
Dchs1E9PVD3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dchs1E9PVD3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.29■■□□□ 1
Dchs1E9PVD3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dchs1E9PVD3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.29■■□□□ 1
Dchs1E9PVD3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.28■■□□□ 1
Dchs1E9PVD3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.28■■□□□ 1
Dchs1E9PVD3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.28■■□□□ 1
Dchs1E9PVD3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dchs1E9PVD3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Dchs1E9PVD3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Dchs1E9PVD3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.27■■□□□ 1
Dchs1E9PVD3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Dchs1E9PVD3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.26■□□□□ 0.99
Dchs1E9PVD3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.25■□□□□ 0.99
Dchs1E9PVD3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.25■□□□□ 0.99
Dchs1E9PVD3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Dchs1E9PVD3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Dchs1E9PVD3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.23■□□□□ 0.99
Dchs1E9PVD3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Dchs1E9PVD3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Dchs1E9PVD3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Dchs1E9PVD3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Dchs1E9PVD3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Dchs1E9PVD3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Dchs1E9PVD3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dchs1E9PVD3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.21■□□□□ 0.99
Dchs1E9PVD3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dchs1E9PVD3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Dchs1E9PVD3 Amer2-203ENSMUST00000225247 2662 ntBASIC21.21■□□□□ 0.99
Dchs1E9PVD3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dchs1E9PVD3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Dchs1E9PVD3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dchs1E9PVD3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dchs1E9PVD3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dchs1E9PVD3 Gm30023-201ENSMUST00000197970 889 ntBASIC21.2■□□□□ 0.98
Dchs1E9PVD3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.2■□□□□ 0.98
Dchs1E9PVD3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dchs1E9PVD3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dchs1E9PVD3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dchs1E9PVD3 Gm45364-201ENSMUST00000210883 159 ntBASIC21.18■□□□□ 0.98
Dchs1E9PVD3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Dchs1E9PVD3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dchs1E9PVD3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Dchs1E9PVD3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dchs1E9PVD3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.17■□□□□ 0.98
Dchs1E9PVD3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dchs1E9PVD3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Dchs1E9PVD3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Dchs1E9PVD3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
Dchs1E9PVD3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dchs1E9PVD3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dchs1E9PVD3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.15■□□□□ 0.98
Dchs1E9PVD3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Dchs1E9PVD3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Dchs1E9PVD3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.14■□□□□ 0.97
Dchs1E9PVD3 Gm27502-201ENSMUST00000183495 199 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms