Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC32.36■■■□□ 2.77
Tmf1B9EKI3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC32.35■■■□□ 2.77
Tmf1B9EKI3 Particl-201ENSMUST00000205370 1560 ntBASIC32.35■■■□□ 2.77
Tmf1B9EKI3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
Tmf1B9EKI3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Tmf1B9EKI3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.34■■■□□ 2.77
Tmf1B9EKI3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Tmf1B9EKI3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Tmf1B9EKI3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Tmf1B9EKI3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC32.31■■■□□ 2.76
Tmf1B9EKI3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Tmf1B9EKI3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Tmf1B9EKI3 Gm11599-201ENSMUST00000118720 878 ntBASIC32.3■■■□□ 2.76
Tmf1B9EKI3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Tmf1B9EKI3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC32.29■■■□□ 2.76
Tmf1B9EKI3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Tmf1B9EKI3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.27■■■□□ 2.76
Tmf1B9EKI3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Tmf1B9EKI3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC32.26■■■□□ 2.75
Tmf1B9EKI3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Tmf1B9EKI3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Tmf1B9EKI3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Tmf1B9EKI3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Tmf1B9EKI3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Tmf1B9EKI3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Tmf1B9EKI3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Tmf1B9EKI3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Tmf1B9EKI3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Tmf1B9EKI3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
Tmf1B9EKI3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Tmf1B9EKI3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.15■■■□□ 2.74
Tmf1B9EKI3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Tmf1B9EKI3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Tmf1B9EKI3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Tmf1B9EKI3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Tmf1B9EKI3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tmf1B9EKI3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
Tmf1B9EKI3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Tmf1B9EKI3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Tmf1B9EKI3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC32.09■■■□□ 2.73
Tmf1B9EKI3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Tmf1B9EKI3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Tmf1B9EKI3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
Tmf1B9EKI3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
Tmf1B9EKI3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Tmf1B9EKI3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Tmf1B9EKI3 Gm37136-201ENSMUST00000194368 194 ntBASIC32.07■■■□□ 2.72
Tmf1B9EKI3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Tmf1B9EKI3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Tmf1B9EKI3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Tmf1B9EKI3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
Tmf1B9EKI3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Tmf1B9EKI3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Tmf1B9EKI3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
Tmf1B9EKI3 Gm37847-201ENSMUST00000192163 1497 ntBASIC32.01■■■□□ 2.71
Tmf1B9EKI3 Gm31748-201ENSMUST00000194938 1497 ntBASIC32.01■■■□□ 2.71
Tmf1B9EKI3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC32■■■□□ 2.71
Tmf1B9EKI3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Tmf1B9EKI3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC31.99■■■□□ 2.71
Tmf1B9EKI3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Tmf1B9EKI3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
Tmf1B9EKI3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Tmf1B9EKI3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Tmf1B9EKI3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Tmf1B9EKI3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Tmf1B9EKI3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Tmf1B9EKI3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Tmf1B9EKI3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
Tmf1B9EKI3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Tmf1B9EKI3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Tmf1B9EKI3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Tmf1B9EKI3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.93■■■□□ 2.7
Tmf1B9EKI3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Tmf1B9EKI3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Tmf1B9EKI3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Tmf1B9EKI3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Tmf1B9EKI3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Tmf1B9EKI3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Tmf1B9EKI3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Tmf1B9EKI3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
Tmf1B9EKI3 Gm14121-201ENSMUST00000121441 1380 ntBASIC31.88■■■□□ 2.69
Tmf1B9EKI3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Tmf1B9EKI3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
Tmf1B9EKI3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Tmf1B9EKI3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tmf1B9EKI3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Tmf1B9EKI3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Tmf1B9EKI3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tmf1B9EKI3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Tmf1B9EKI3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tmf1B9EKI3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Tmf1B9EKI3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.83■■■□□ 2.69
Tmf1B9EKI3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.83■■■□□ 2.69
Tmf1B9EKI3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Tmf1B9EKI3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.82■■■□□ 2.68
Tmf1B9EKI3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tmf1B9EKI3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tmf1B9EKI3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tmf1B9EKI3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Tmf1B9EKI3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms