Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm11127A7VMS2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm11127A7VMS2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Gm11127A7VMS2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.65■□□□□ 0.9
Gm11127A7VMS2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm11127A7VMS2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm11127A7VMS2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm11127A7VMS2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm11127A7VMS2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm11127A7VMS2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11127A7VMS2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11127A7VMS2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11127A7VMS2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gm11127A7VMS2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11127A7VMS2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11127A7VMS2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm11127A7VMS2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm11127A7VMS2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm11127A7VMS2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm11127A7VMS2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm11127A7VMS2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm11127A7VMS2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm11127A7VMS2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm11127A7VMS2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm11127A7VMS2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.61■□□□□ 0.89
Gm11127A7VMS2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Gm11127A7VMS2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11127A7VMS2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11127A7VMS2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11127A7VMS2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11127A7VMS2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11127A7VMS2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11127A7VMS2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11127A7VMS2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11127A7VMS2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Gm11127A7VMS2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm11127A7VMS2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm11127A7VMS2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm11127A7VMS2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm11127A7VMS2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm11127A7VMS2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Gm11127A7VMS2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm11127A7VMS2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11127A7VMS2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11127A7VMS2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11127A7VMS2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Gm11127A7VMS2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11127A7VMS2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gm11127A7VMS2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11127A7VMS2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11127A7VMS2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11127A7VMS2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11127A7VMS2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11127A7VMS2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11127A7VMS2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11127A7VMS2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11127A7VMS2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11127A7VMS2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.53■□□□□ 0.88
Gm11127A7VMS2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11127A7VMS2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm11127A7VMS2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gm11127A7VMS2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11127A7VMS2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11127A7VMS2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11127A7VMS2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11127A7VMS2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11127A7VMS2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11127A7VMS2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Gm11127A7VMS2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm11127A7VMS2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm11127A7VMS2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm11127A7VMS2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Gm11127A7VMS2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm11127A7VMS2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Gm11127A7VMS2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11127A7VMS2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11127A7VMS2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11127A7VMS2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11127A7VMS2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11127A7VMS2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11127A7VMS2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11127A7VMS2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11127A7VMS2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11127A7VMS2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11127A7VMS2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.47■□□□□ 0.87
Gm11127A7VMS2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11127A7VMS2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11127A7VMS2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Gm11127A7VMS2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.46■□□□□ 0.87
Gm11127A7VMS2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11127A7VMS2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11127A7VMS2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm11127A7VMS2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm11127A7VMS2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm11127A7VMS2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gm11127A7VMS2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm11127A7VMS2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11127A7VMS2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.44■□□□□ 0.86
Gm11127A7VMS2 Zfp131-205ENSMUST00000223812 663 ntBASIC20.44■□□□□ 0.86
Gm11127A7VMS2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms