Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-4A0A140T8Q4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-4A0A140T8Q4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Igkv3-4A0A140T8Q4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-4A0A140T8Q4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-4A0A140T8Q4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv3-4A0A140T8Q4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv3-4A0A140T8Q4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv3-4A0A140T8Q4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Igkv3-4A0A140T8Q4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Igkv3-4A0A140T8Q4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-4A0A140T8Q4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-4A0A140T8Q4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-4A0A140T8Q4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-4A0A140T8Q4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-4A0A140T8Q4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-4A0A140T8Q4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Igkv3-4A0A140T8Q4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-4A0A140T8Q4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-4A0A140T8Q4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-4A0A140T8Q4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Igkv3-4A0A140T8Q4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Igkv3-4A0A140T8Q4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv3-4A0A140T8Q4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv3-4A0A140T8Q4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-4A0A140T8Q4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-4A0A140T8Q4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Igkv3-4A0A140T8Q4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Igkv3-4A0A140T8Q4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Igkv3-4A0A140T8Q4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC14.6□□□□□ -0.07
Igkv3-4A0A140T8Q4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv3-4A0A140T8Q4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-4A0A140T8Q4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-4A0A140T8Q4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC14.59□□□□□ -0.07
Igkv3-4A0A140T8Q4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-4A0A140T8Q4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Igkv3-4A0A140T8Q4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Igkv3-4A0A140T8Q4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-4A0A140T8Q4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-4A0A140T8Q4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Igkv3-4A0A140T8Q4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-4A0A140T8Q4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Igkv3-4A0A140T8Q4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-4A0A140T8Q4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-4A0A140T8Q4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-4A0A140T8Q4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-4A0A140T8Q4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-4A0A140T8Q4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-4A0A140T8Q4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-4A0A140T8Q4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-4A0A140T8Q4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-4A0A140T8Q4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Igkv3-4A0A140T8Q4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-4A0A140T8Q4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-4A0A140T8Q4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Igkv3-4A0A140T8Q4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-4A0A140T8Q4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-4A0A140T8Q4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.53□□□□□ -0.08
Igkv3-4A0A140T8Q4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-4A0A140T8Q4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-4A0A140T8Q4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Igkv3-4A0A140T8Q4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Igkv3-4A0A140T8Q4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Igkv3-4A0A140T8Q4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Igkv3-4A0A140T8Q4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Igkv3-4A0A140T8Q4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-4A0A140T8Q4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-4A0A140T8Q4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-4A0A140T8Q4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.51□□□□□ -0.09
Igkv3-4A0A140T8Q4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-4A0A140T8Q4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-4A0A140T8Q4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-4A0A140T8Q4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms