Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9n-2A0A0G2JDP3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9n-2A0A0G2JDP3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17■□□□□ 0.31
Trav9n-2A0A0G2JDP3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.98■□□□□ 0.31
Trav9n-2A0A0G2JDP3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9n-2A0A0G2JDP3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav9n-2A0A0G2JDP3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9n-2A0A0G2JDP3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Nkain2-201ENSMUST00000092602 558 ntBASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav9n-2A0A0G2JDP3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav9n-2A0A0G2JDP3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.91■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9n-2A0A0G2JDP3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.88■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.88■□□□□ 0.29
Trav9n-2A0A0G2JDP3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.88■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms