Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms