Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Igkv5-43A0A0B4J1J2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.62■■□□□ 1.53
Igkv5-43A0A0B4J1J2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Igkv5-43A0A0B4J1J2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Igkv5-43A0A0B4J1J2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Igkv5-43A0A0B4J1J2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.59■■□□□ 1.53
Igkv5-43A0A0B4J1J2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Igkv5-43A0A0B4J1J2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.57■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Igkv5-43A0A0B4J1J2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.5■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.47■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Igkv5-43A0A0B4J1J2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Igkv5-43A0A0B4J1J2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Igkv5-43A0A0B4J1J2 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.45■■□□□ 1.5
Igkv5-43A0A0B4J1J2 Gm37136-201ENSMUST00000194368 194 ntBASIC24.44■■□□□ 1.5
Igkv5-43A0A0B4J1J2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Igkv5-43A0A0B4J1J2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Igkv5-43A0A0B4J1J2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.41■■□□□ 1.5
Igkv5-43A0A0B4J1J2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.4■■□□□ 1.5
Igkv5-43A0A0B4J1J2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Igkv5-43A0A0B4J1J2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.39■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Igkv5-43A0A0B4J1J2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv5-43A0A0B4J1J2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.36■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.36■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv5-43A0A0B4J1J2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv5-43A0A0B4J1J2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.33■■□□□ 1.49
Igkv5-43A0A0B4J1J2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.33■■□□□ 1.49
Igkv5-43A0A0B4J1J2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.29■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.29■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.29■■□□□ 1.48
Igkv5-43A0A0B4J1J2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Igkv5-43A0A0B4J1J2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.28■■□□□ 1.48
Igkv5-43A0A0B4J1J2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.25■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.24■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.22■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Igkv5-43A0A0B4J1J2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.2■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.19■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Gm4799-201ENSMUST00000095396 657 ntBASIC24.19■■□□□ 1.46
Igkv5-43A0A0B4J1J2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.19■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.18■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Gm6311-201ENSMUST00000073790 878 ntBASIC24.18■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Igkv5-43A0A0B4J1J2 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.16■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.16■■□□□ 1.46
Igkv5-43A0A0B4J1J2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms