Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Ighv1-43A0A0A6YXN5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ighv1-43A0A0A6YXN5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv1-43A0A0A6YXN5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.94■■□□□ 1.1
Ighv1-43A0A0A6YXN5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.94■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Gm6311-201ENSMUST00000073790 878 ntBASIC21.94■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.93■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Gm37136-201ENSMUST00000194368 194 ntBASIC21.93■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ighv1-43A0A0A6YXN5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-43A0A0A6YXN5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.9■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv1-43A0A0A6YXN5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ighv1-43A0A0A6YXN5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.88■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-43A0A0A6YXN5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.87■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.85■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Gm4799-201ENSMUST00000095396 657 ntBASIC21.85■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Amer2-203ENSMUST00000225247 2662 ntBASIC21.85■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.84■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv1-43A0A0A6YXN5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.84■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Gm11175-201ENSMUST00000116172 543 ntBASIC21.83■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Mir6538-201ENSMUST00000183713 110 ntBASIC21.83■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv1-43A0A0A6YXN5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-43A0A0A6YXN5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv1-43A0A0A6YXN5 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.81■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.8■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Mir3960-201ENSMUST00000198213 73 ntBASIC21.78■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv1-43A0A0A6YXN5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.74■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.72■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.71■■□□□ 1.07
Ighv1-43A0A0A6YXN5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv1-43A0A0A6YXN5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.7■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gm45364-201ENSMUST00000210883 159 ntBASIC21.69■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.69■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms