Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trbc1A0A0A6YWV4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trbc1A0A0A6YWV4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trbc1A0A0A6YWV4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trbc1A0A0A6YWV4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trbc1A0A0A6YWV4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trbc1A0A0A6YWV4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.62■■□□□ 1.05
Trbc1A0A0A6YWV4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trbc1A0A0A6YWV4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trbc1A0A0A6YWV4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trbc1A0A0A6YWV4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trbc1A0A0A6YWV4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Trbc1A0A0A6YWV4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.6■■□□□ 1.05
Trbc1A0A0A6YWV4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.6■■□□□ 1.05
Trbc1A0A0A6YWV4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.59■■□□□ 1.05
Trbc1A0A0A6YWV4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trbc1A0A0A6YWV4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trbc1A0A0A6YWV4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trbc1A0A0A6YWV4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trbc1A0A0A6YWV4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.58■■□□□ 1.04
Trbc1A0A0A6YWV4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trbc1A0A0A6YWV4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Trbc1A0A0A6YWV4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trbc1A0A0A6YWV4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Trbc1A0A0A6YWV4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trbc1A0A0A6YWV4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trbc1A0A0A6YWV4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trbc1A0A0A6YWV4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trbc1A0A0A6YWV4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trbc1A0A0A6YWV4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trbc1A0A0A6YWV4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trbc1A0A0A6YWV4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trbc1A0A0A6YWV4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.53■■□□□ 1.04
Trbc1A0A0A6YWV4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trbc1A0A0A6YWV4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trbc1A0A0A6YWV4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.52■■□□□ 1.04
Trbc1A0A0A6YWV4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.52■■□□□ 1.04
Trbc1A0A0A6YWV4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trbc1A0A0A6YWV4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Trbc1A0A0A6YWV4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.51■■□□□ 1.03
Trbc1A0A0A6YWV4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trbc1A0A0A6YWV4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trbc1A0A0A6YWV4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trbc1A0A0A6YWV4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trbc1A0A0A6YWV4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trbc1A0A0A6YWV4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trbc1A0A0A6YWV4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trbc1A0A0A6YWV4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Trbc1A0A0A6YWV4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trbc1A0A0A6YWV4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trbc1A0A0A6YWV4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trbc1A0A0A6YWV4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Trbc1A0A0A6YWV4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trbc1A0A0A6YWV4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trbc1A0A0A6YWV4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trbc1A0A0A6YWV4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trbc1A0A0A6YWV4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Trbc1A0A0A6YWV4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trbc1A0A0A6YWV4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.46■■□□□ 1.03
Trbc1A0A0A6YWV4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Trbc1A0A0A6YWV4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trbc1A0A0A6YWV4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trbc1A0A0A6YWV4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trbc1A0A0A6YWV4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trbc1A0A0A6YWV4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trbc1A0A0A6YWV4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trbc1A0A0A6YWV4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trbc1A0A0A6YWV4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trbc1A0A0A6YWV4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trbc1A0A0A6YWV4 Gm7432-201ENSMUST00000210343 879 ntBASIC21.42■■□□□ 1.02
Trbc1A0A0A6YWV4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trbc1A0A0A6YWV4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trbc1A0A0A6YWV4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trbc1A0A0A6YWV4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trbc1A0A0A6YWV4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trbc1A0A0A6YWV4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trbc1A0A0A6YWV4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.41■■□□□ 1.02
Trbc1A0A0A6YWV4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trbc1A0A0A6YWV4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trbc1A0A0A6YWV4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trbc1A0A0A6YWV4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Trbc1A0A0A6YWV4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trbc1A0A0A6YWV4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trbc1A0A0A6YWV4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Trbc1A0A0A6YWV4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trbc1A0A0A6YWV4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trbc1A0A0A6YWV4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Trbc1A0A0A6YWV4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.37■■□□□ 1.01
Trbc1A0A0A6YWV4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
Trbc1A0A0A6YWV4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trbc1A0A0A6YWV4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trbc1A0A0A6YWV4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.36■■□□□ 1.01
Trbc1A0A0A6YWV4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trbc1A0A0A6YWV4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
Trbc1A0A0A6YWV4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trbc1A0A0A6YWV4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trbc1A0A0A6YWV4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trbc1A0A0A6YWV4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trbc1A0A0A6YWV4 Particl-201ENSMUST00000205370 1560 ntBASIC21.35■■□□□ 1.01
Trbc1A0A0A6YWV4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms