Protein–RNA interactions for Protein: A0A0A6YWG2

Ighv1-5, Immunoglobulin heavy variable V1-5 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-5A0A0A6YWG2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.23■□□□□ 0.35
Ighv1-5A0A0A6YWG2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-5A0A0A6YWG2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ighv1-5A0A0A6YWG2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-5A0A0A6YWG2 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.22■□□□□ 0.35
Ighv1-5A0A0A6YWG2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ighv1-5A0A0A6YWG2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-5A0A0A6YWG2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-5A0A0A6YWG2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.19■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-5A0A0A6YWG2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Gm30023-201ENSMUST00000197970 889 ntBASIC17.15■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.15■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ighv1-5A0A0A6YWG2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-5A0A0A6YWG2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-5A0A0A6YWG2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.14■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.12■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.12■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.12■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Gm7432-201ENSMUST00000210343 879 ntBASIC17.11■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Ighv1-5A0A0A6YWG2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-5A0A0A6YWG2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.08■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.07■□□□□ 0.32
Ighv1-5A0A0A6YWG2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.06■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.04■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-5A0A0A6YWG2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ighv1-5A0A0A6YWG2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.02■□□□□ 0.32
Ighv1-5A0A0A6YWG2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-5A0A0A6YWG2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Gm11599-201ENSMUST00000118720 878 ntBASIC17.01■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
Ighv1-5A0A0A6YWG2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-5A0A0A6YWG2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Particl-201ENSMUST00000205370 1560 ntBASIC16.99■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.99■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.98■□□□□ 0.31
Ighv1-5A0A0A6YWG2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ighv1-5A0A0A6YWG2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms