Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19,21■□□□□ 0,67
Trav15-2-dv6-2A0A075B650 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19,21■□□□□ 0,67
Trav15-2-dv6-2A0A075B650 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19,2■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19,19■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19,19■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19,19■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19,18■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19,18■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19,18■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19,17■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19,17■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19,15■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19,15■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19,15■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Il17rd-202ENSMUST00000223942 2186 ntBASIC19,15■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19,14■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19,14■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19,14■□□□□ 0,66
Trav15-2-dv6-2A0A075B650 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19,13■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19,13■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19,13■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19,13■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19,12■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19,12■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19,12■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19,11■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19,09■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19,08■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19,08■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19,08■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19,08■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19,08■□□□□ 0,65
Trav15-2-dv6-2A0A075B650 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19,08■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19,07■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19,07■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19,07■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19,06■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19,05■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19,05■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19,05■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19,05■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19,05■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19,04■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19,03■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19,03■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19,03■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19,03■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19,02■□□□□ 0,64
Trav15-2-dv6-2A0A075B650 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19,02■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19,01■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19,01■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19,01■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19,01■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19,01■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Gm43863-201ENSMUST00000203822 1192 ntBASIC19■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18,99■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18,99■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18,99■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18,98■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18,98■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18,97■□□□□ 0,63
Retrieved 100 of 76,532 protein–RNA pairs in 10,6 ms