Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16nA0A075B634 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16nA0A075B634 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav16nA0A075B634 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16nA0A075B634 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16nA0A075B634 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16nA0A075B634 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16nA0A075B634 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16nA0A075B634 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav16nA0A075B634 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16nA0A075B634 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16nA0A075B634 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16nA0A075B634 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16nA0A075B634 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trav16nA0A075B634 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16nA0A075B634 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16nA0A075B634 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16nA0A075B634 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.67■□□□□ 0.42
Trav16nA0A075B634 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16nA0A075B634 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16nA0A075B634 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16nA0A075B634 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav16nA0A075B634 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav16nA0A075B634 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Trav16nA0A075B634 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav16nA0A075B634 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav16nA0A075B634 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav16nA0A075B634 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav16nA0A075B634 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav16nA0A075B634 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav16nA0A075B634 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav16nA0A075B634 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav16nA0A075B634 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav16nA0A075B634 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16nA0A075B634 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16nA0A075B634 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav16nA0A075B634 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16nA0A075B634 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16nA0A075B634 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16nA0A075B634 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16nA0A075B634 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16nA0A075B634 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav16nA0A075B634 Gm16148-201ENSMUST00000119653 893 ntBASIC17.61■□□□□ 0.41
Trav16nA0A075B634 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav16nA0A075B634 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav16nA0A075B634 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav16nA0A075B634 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav16nA0A075B634 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav16nA0A075B634 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trav16nA0A075B634 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16nA0A075B634 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16nA0A075B634 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16nA0A075B634 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav16nA0A075B634 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav16nA0A075B634 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav16nA0A075B634 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav16nA0A075B634 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav16nA0A075B634 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav16nA0A075B634 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16nA0A075B634 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16nA0A075B634 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16nA0A075B634 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16nA0A075B634 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trav16nA0A075B634 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav16nA0A075B634 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16nA0A075B634 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16nA0A075B634 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16nA0A075B634 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16nA0A075B634 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16nA0A075B634 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav16nA0A075B634 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16nA0A075B634 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav16nA0A075B634 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16nA0A075B634 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16nA0A075B634 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16nA0A075B634 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16nA0A075B634 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16nA0A075B634 Gm24804-201ENSMUST00000174982 85 ntBASIC17.53■□□□□ 0.4
Trav16nA0A075B634 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav16nA0A075B634 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16nA0A075B634 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16nA0A075B634 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16nA0A075B634 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16nA0A075B634 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16nA0A075B634 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav16nA0A075B634 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms