Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav6-6A0A075B603 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-6A0A075B603 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-6A0A075B603 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav6-6A0A075B603 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-6A0A075B603 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-6A0A075B603 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-6A0A075B603 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-6A0A075B603 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-6A0A075B603 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-6A0A075B603 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav6-6A0A075B603 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav6-6A0A075B603 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav6-6A0A075B603 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-6A0A075B603 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-6A0A075B603 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-6A0A075B603 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav6-6A0A075B603 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-6A0A075B603 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav6-6A0A075B603 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-6A0A075B603 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-6A0A075B603 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav6-6A0A075B603 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-6A0A075B603 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-6A0A075B603 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-6A0A075B603 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-6A0A075B603 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-6A0A075B603 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-6A0A075B603 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6-6A0A075B603 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav6-6A0A075B603 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-6A0A075B603 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-6A0A075B603 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-6A0A075B603 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-6A0A075B603 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-6A0A075B603 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-6A0A075B603 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Trav6-6A0A075B603 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-6A0A075B603 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-6A0A075B603 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-6A0A075B603 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-6A0A075B603 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav6-6A0A075B603 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.33■□□□□ 0.37
Trav6-6A0A075B603 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav6-6A0A075B603 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-6A0A075B603 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-6A0A075B603 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-6A0A075B603 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-6A0A075B603 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-6A0A075B603 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-6A0A075B603 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-6A0A075B603 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-6A0A075B603 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-6A0A075B603 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-6A0A075B603 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-6A0A075B603 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6-6A0A075B603 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-6A0A075B603 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-6A0A075B603 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-6A0A075B603 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-6A0A075B603 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-6A0A075B603 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-6A0A075B603 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav6-6A0A075B603 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-6A0A075B603 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-6A0A075B603 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trav6-6A0A075B603 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-6A0A075B603 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-6A0A075B603 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav6-6A0A075B603 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-6A0A075B603 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-6A0A075B603 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-6A0A075B603 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-6A0A075B603 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-6A0A075B603 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-6A0A075B603 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-6A0A075B603 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-6A0A075B603 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Trav6-6A0A075B603 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav6-6A0A075B603 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-6A0A075B603 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav6-6A0A075B603 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-6A0A075B603 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-6A0A075B603 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-6A0A075B603 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms