Protein–RNA interactions for Protein: A0A075B5T0

Ighv3-8, Immunoglobulin heavy variable V3-8 (Fragment), mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-8A0A075B5T0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-8A0A075B5T0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ighv3-8A0A075B5T0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-8A0A075B5T0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ighv3-8A0A075B5T0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv3-8A0A075B5T0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv3-8A0A075B5T0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Ighv3-8A0A075B5T0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv3-8A0A075B5T0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-8A0A075B5T0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-8A0A075B5T0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-8A0A075B5T0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Ighv3-8A0A075B5T0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-8A0A075B5T0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-8A0A075B5T0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.61■□□□□ 0.41
Ighv3-8A0A075B5T0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-8A0A075B5T0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-8A0A075B5T0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-8A0A075B5T0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-8A0A075B5T0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-8A0A075B5T0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv3-8A0A075B5T0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv3-8A0A075B5T0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv3-8A0A075B5T0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.59■□□□□ 0.41
Ighv3-8A0A075B5T0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv3-8A0A075B5T0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv3-8A0A075B5T0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ighv3-8A0A075B5T0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv3-8A0A075B5T0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-8A0A075B5T0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.57■□□□□ 0.4
Ighv3-8A0A075B5T0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.57■□□□□ 0.4
Ighv3-8A0A075B5T0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-8A0A075B5T0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ighv3-8A0A075B5T0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.56■□□□□ 0.4
Ighv3-8A0A075B5T0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv3-8A0A075B5T0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.55■□□□□ 0.4
Ighv3-8A0A075B5T0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv3-8A0A075B5T0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.55■□□□□ 0.4
Ighv3-8A0A075B5T0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-8A0A075B5T0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ighv3-8A0A075B5T0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-8A0A075B5T0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.54■□□□□ 0.4
Ighv3-8A0A075B5T0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-8A0A075B5T0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-8A0A075B5T0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-8A0A075B5T0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-8A0A075B5T0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-8A0A075B5T0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-8A0A075B5T0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv3-8A0A075B5T0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv3-8A0A075B5T0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.52■□□□□ 0.4
Ighv3-8A0A075B5T0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
Ighv3-8A0A075B5T0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv3-8A0A075B5T0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-8A0A075B5T0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.51■□□□□ 0.39
Ighv3-8A0A075B5T0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-8A0A075B5T0 Nkain2-201ENSMUST00000092602 558 ntBASIC17.51■□□□□ 0.39
Ighv3-8A0A075B5T0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-8A0A075B5T0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-8A0A075B5T0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-8A0A075B5T0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ighv3-8A0A075B5T0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.5■□□□□ 0.39
Ighv3-8A0A075B5T0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-8A0A075B5T0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv3-8A0A075B5T0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.49■□□□□ 0.39
Ighv3-8A0A075B5T0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-8A0A075B5T0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ighv3-8A0A075B5T0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-8A0A075B5T0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-8A0A075B5T0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms