Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC020910.2-201ENST00000603635 610 ntBASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 AP005131.7-201ENST00000610087 611 ntBASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 TP53TG1_2.1-201ENST00000611226 182 ntBASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 MIR6785-201ENST00000618984 81 ntBASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 AC008785.1-201ENST00000624475 456 ntBASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 AC022919.1-201ENST00000624979 626 ntBASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 U6.98-201ENST00000637157 84 ntBASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LINC01558Q9Y6Z2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 LINC00561-201ENST00000565815 2738 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 RNU1-18P-201ENST00000363062 164 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SKP76-201ENST00000364419 323 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SKP1-201ENST00000365525 307 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 RNA5SP151-201ENST00000365632 117 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 LYPLA1P3-201ENST00000402650 695 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 ARL4AP5-201ENST00000404372 599 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 CHEK2P3-201ENST00000416118 248 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC119751.6-201ENST00000416712 186 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AIMP1P1-201ENST00000418670 937 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 RPL12P28-201ENST00000430852 489 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 GSTM5P1-201ENST00000434751 660 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 OR6D1P-201ENST00000436165 939 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC023141.3-201ENST00000436698 278 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 RPS29P10-201ENST00000439197 166 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC073850.1-201ENST00000449243 255 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 MTCO3P16-201ENST00000454456 754 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 PPIAP21-201ENST00000464473 501 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SL329P-201ENST00000467740 299 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 BTF3L4P4-201ENST00000506381 449 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC107952.1-201ENST00000524200 376 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 IGLV3-30-201ENST00000524362 298 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 MTND5P21-201ENST00000531961 522 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 OR5AN2P-201ENST00000534535 896 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 ILF2P2-201ENST00000547482 1117 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 FKBP1BP1-201ENST00000553366 325 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 DPPA2P4-201ENST00000563717 878 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC021483.2-201ENST00000567415 758 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AP005136.2-201ENST00000583253 1049 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AL592295.2-201ENST00000612578 206 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 AC012676.3-201ENST00000614983 479 ntBASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 SPATA2P1-201ENST00000431223 2055 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms