Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 RNU6-359P-201ENST00000365466 108 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SKP140-201ENST00000411196 284 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AL353678.1-201ENST00000422735 741 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 RPL35AP12-201ENST00000425362 338 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AL731892.1-201ENST00000437364 1192 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 BRK1P2-201ENST00000442875 223 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 SPRYD7P1-201ENST00000443861 570 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC009244.1-201ENST00000450566 258 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 BX842559.2-201ENST00000451418 605 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC098583.1-201ENST00000480875 255 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SL152P-201ENST00000484176 298 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 RPS15AP36-201ENST00000492022 382 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 RPL23AP80-201ENST00000495605 424 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC011352.2-201ENST00000514574 1016 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC130366.1-201ENST00000526505 1192 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AL109766.1-201ENST00000555080 552 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AL589863.1-201ENST00000595383 631 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC004853.1-201ENST00000604902 698 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC113139.1-201ENST00000605049 239 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 MIR6813-201ENST00000621638 56 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 LINC00622-201ENST00000562811 1570 ntBASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB11Q9Y5F2 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 RNA5SP177-201ENST00000410122 107 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 RNU2-8P-201ENST00000410727 190 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SKP29-201ENST00000410957 272 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 RPS7P15-201ENST00000415804 584 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 MRPL50P2-201ENST00000416821 482 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 MTATP6P18-201ENST00000417994 673 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AL593856.1-201ENST00000419949 805 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 OR2B7P-201ENST00000429302 934 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 ANXA2P2-201ENST00000435128 1020 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AL604028.2-201ENST00000437848 788 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 MTND3P2-201ENST00000438452 342 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 MTND6P18-201ENST00000439477 513 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AL356121.1-201ENST00000442911 156 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC002486.2-201ENST00000447806 590 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SKP13-201ENST00000515933 244 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC087360.1-201ENST00000518788 616 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms