Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 MIR208A-201ENST00000362287 71 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 RN7SKP280-201ENST00000364196 304 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 SNORA70C-201ENST00000384538 135 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 CEACAMP8-201ENST00000413902 580 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AL162591.2-201ENST00000449634 317 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AC005868.1-201ENST00000536421 331 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AC073137.1-201ENST00000605636 634 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 Z95327.3-201ENST00000610385 572 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AP000648.2-201ENST00000624182 404 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 H2AFZP5-201ENST00000446960 382 ntBASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 AC009963.4-201ENST00000448535 339 ntBASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 CYCSP34-201ENST00000458172 304 ntBASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 SNORA67.7-201ENST00000516664 135 ntBASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 AL592182.3-201ENST00000642132 3304 ntBASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.03□□□□□ -1.28
SHANK2Q9UPX8 AL137918.1-201ENST00000624542 1922 ntBASIC7.02□□□□□ -1.28
SHANK2Q9UPX8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 RNU6-761P-201ENST00000384148 107 ntBASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 AP000580.1-201ENST00000404439 358 ntBASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 RPL21P108-201ENST00000413857 481 ntBASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 RN7SL652P-201ENST00000577769 300 ntBASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK2Q9UPX8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AC107068.1-201ENST00000563286 4218 ntBASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AC021146.4-201ENST00000309229 279 ntBASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 OR4K17-201ENST00000315543 1032 ntBASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 SNORA11.1-201ENST00000408133 129 ntBASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 CASKP1-201ENST00000412870 582 ntBASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AC084783.1-201ENST00000565846 910 ntBASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AL049536.1-201ENST00000625043 744 ntBASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHANK2Q9UPX8 SALL4P2-201ENST00000423288 2910 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 RGS17P1-201ENST00000423358 553 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 RPS12P10-201ENST00000427031 377 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 AC090142.1-201ENST00000465776 462 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 AC106806.2-201ENST00000509365 500 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 AC027216.1-201ENST00000577726 685 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 AC015914.2-201ENST00000618167 288 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 AP001153.1-201ENST00000641024 338 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7□□□□□ -1.29
SHANK2Q9UPX8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7□□□□□ -1.29
SHANK2Q9UPX8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SHANK2Q9UPX8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms