Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 NME1P1-201ENST00000420914 382 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL133325.1-201ENST00000421090 382 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 ARL5AP3-201ENST00000439327 386 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL353572.1-201ENST00000442490 417 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC009961.3-201ENST00000449832 765 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 RPS7P7-201ENST00000463499 571 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 SRRM1P2-201ENST00000464531 1192 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC023194.2-201ENST00000465398 406 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC090602.1-201ENST00000469695 252 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 RPL21P47-201ENST00000483696 477 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC083795.1-201ENST00000491760 320 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 OR2A3P-201ENST00000493774 953 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC010460.1-201ENST00000507087 466 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC093770.1-201ENST00000511559 571 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 RNU6-759P-201ENST00000516740 103 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 RNU6-1028P-201ENST00000517164 93 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AP004609.2-201ENST00000532177 190 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 ZNF415P1-201ENST00000582279 1166 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC107993.1-201ENST00000591343 684 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC078795.2-201ENST00000602835 1252 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL590229.1-201ENST00000603497 542 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL513477.2-201ENST00000607858 568 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC109347.2-201ENST00000610220 349 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC068944.2-201ENST00000610373 403 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL035661.1-201ENST00000620459 1144 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC015804.1-201ENST00000622935 435 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC091931.1-201ENST00000623488 728 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC129778.1-202ENST00000623812 261 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC010608.2-201ENST00000624830 470 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC092159.4-201ENST00000624944 550 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL591379.1-207ENST00000635982 261 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 GVINP1-202ENST00000531871 7271 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 MTCO1P28-201ENST00000574177 1528 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC011503.2-201ENST00000594230 1500 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 BX005019.1-201ENST00000561881 1810 ntBASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 AL034549.2-201ENST00000618285 3373 ntBASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 AL049737.1-201ENST00000413920 1403 ntBASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 RNA5SP326-201ENST00000363209 110 ntBASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 RNU5B-1-201ENST00000363286 116 ntBASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PACSIN3Q9UKS6 RNU1-136P-201ENST00000384181 164 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms