Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC133552.5-201ENST00000604266 540 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 MEMO1P5-201ENST00000604810 406 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AL121932.1-201ENST00000605542 214 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 MIR6861-201ENST00000618657 64 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC026124.2-201ENST00000621847 656 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC093775.1-201ENST00000624154 1868 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 TLK1P1-201ENST00000456760 2440 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AL121950.1-201ENST00000624993 2077 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AP001273.1-201ENST00000624493 3152 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 MIR323A-201ENST00000362199 86 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 RN7SKP224-201ENST00000364140 325 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 RNU6-729P-201ENST00000384399 107 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 SNORA70-201ENST00000384436 135 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 U3.25-201ENST00000391209 220 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 GTF2IP5-201ENST00000414608 731 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 VN1R31P-201ENST00000417498 730 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC144530.1-201ENST00000452862 555 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC107015.1-201ENST00000466902 747 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 RN7SL222P-201ENST00000476452 299 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AP002981.1-201ENST00000517692 975 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC005520.3-201ENST00000602874 370 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AL359757.1-201ENST00000623176 255 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AL049767.1-202ENST00000637826 242 ntBASIC4.52□□□□□ -1.69
VAPAQ9P0L0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VAPAQ9P0L0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 RN7SKP15-201ENST00000364742 309 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 MIR195-201ENST00000385194 87 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 SNORA68.2-201ENST00000391263 128 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 Z97832.1-201ENST00000402490 328 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LINC00993-201ENST00000420453 540 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 OR2AM1P-201ENST00000422137 422 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AL645608.4-201ENST00000423619 154 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 SETP20-201ENST00000457046 852 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 BX284632.1-201ENST00000478218 541 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC090114.3-201ENST00000479267 829 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC104971.1-201ENST00000495117 578 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC015912.2-201ENST00000571053 181 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms