Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AL645927.1-201ENST00000396783 406 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 HYALP1-201ENST00000417674 1279 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC092570.3-201ENST00000420113 693 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC007161.1-204ENST00000423039 460 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 RPL7AP49-201ENST00000429522 581 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AL512637.2-201ENST00000431287 1256 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AL591438.1-201ENST00000433508 581 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 EEF1B2P5-201ENST00000444820 548 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC105399.1-202ENST00000447303 205 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC005532.2-201ENST00000467154 373 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC004815.1-201ENST00000484185 331 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 RN7SL290P-201ENST00000578661 300 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC091057.3-201ENST00000602684 733 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC073137.1-201ENST00000605636 634 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AL135786.2-201ENST00000608422 615 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC025574.2-201ENST00000615621 514 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC068870.2-201ENST00000620635 389 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 RPL23AP61-201ENST00000623642 466 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 AC005005.4-201ENST00000623789 16698 ntBASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NCKIPSDQ9NZQ3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AL078621.3-201ENST00000623707 2042 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 THAP12P5-201ENST00000405864 2275 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 RNU4-7P-201ENST00000364758 141 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 MT-TP-201ENST00000387461 68 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AL390774.1-201ENST00000411924 246 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 TATDN1P1-201ENST00000414123 891 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AL590806.1-201ENST00000415818 853 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 RPA2P2-201ENST00000419698 796 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 FAM96AP1-201ENST00000430879 482 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 HMGB3P10-201ENST00000434734 572 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 MTCYBP21-201ENST00000443300 1113 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 SYT14P1-201ENST00000481459 721 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AC072052.1-201ENST00000496556 306 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 RPEP1-201ENST00000504507 658 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AC002456.2-201ENST00000509356 380 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 RNU6-334P-201ENST00000517072 102 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 UBTFL9-201ENST00000534504 1148 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 MTND1P24-201ENST00000552175 861 ntBASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.41□□□□□ -1.54
NCKIPSDQ9NZQ3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms