Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNA5SP176-201ENST00000390956 110 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 SNX18P13-201ENST00000412442 529 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 HMGB3P23-201ENST00000414981 585 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL009174.1-201ENST00000426577 416 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC099340.1-201ENST00000475247 599 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL079303.1-201ENST00000486611 463 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 HMGN2P25-201ENST00000486956 268 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 RN7SL37P-201ENST00000490461 307 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC007068.2-201ENST00000543168 395 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC137768.1-201ENST00000549998 553 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC068305.2-201ENST00000550567 1205 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC009120.3-201ENST00000563335 499 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL138976.2-201ENST00000563989 694 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 MIR3913-1-201ENST00000577744 102 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 RN7SL208P-201ENST00000577964 296 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC245052.7-201ENST00000601161 359 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC087045.1-201ENST00000605856 382 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC107214.2-201ENST00000608204 634 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC093388.1-201ENST00000609166 430 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC018816.2-201ENST00000621460 353 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AC061999.1-201ENST00000624454 177 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 FKBP1AP4-201ENST00000631775 336 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 CLUHP10-201ENST00000631979 980 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 MIR665-201ENST00000635949 72 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSU72Q9NP77 AC023245.2-201ENST00000530760 2978 ntBASIC6.4□□□□□ -1.39
SSU72Q9NP77 AL359976.1-201ENST00000418655 3528 ntBASIC6.4□□□□□ -1.39
SSU72Q9NP77 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSU72Q9NP77 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSU72Q9NP77 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSU72Q9NP77 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SSU72Q9NP77 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
SSU72Q9NP77 AP002001.2-201ENST00000529025 1469 ntBASIC6.4□□□□□ -1.39
SSU72Q9NP77 AC004014.2-201ENST00000623718 5122 ntBASIC6.4□□□□□ -1.39
SSU72Q9NP77 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSU72Q9NP77 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSU72Q9NP77 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 Y_RNA.9-201ENST00000362354 101 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 RNU6-1339P-201ENST00000363574 91 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 RNA5SP88-201ENST00000365560 109 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 RNU6-116P-201ENST00000384042 109 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 Y_RNA.453-201ENST00000384223 109 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 PDCL3P5-201ENST00000398028 722 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 ARL4AP5-201ENST00000404372 599 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 NUP35P2-201ENST00000416748 943 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AL136231.1-201ENST00000429407 730 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 FTH1P16-201ENST00000435241 552 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 OR7E125P-201ENST00000443450 846 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 DPPA3P1-201ENST00000448050 469 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 RPL7P31-201ENST00000450192 724 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 snoU13.29-201ENST00000459370 104 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AP002884.1-201ENST00000479691 655 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms