Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC235565.1-201ENST00000456962 1325 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 DDX18P5-201ENST00000534547 1306 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC092747.4-201ENST00000620519 1861 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 RNA5SP122-201ENST00000384457 108 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL592291.1-201ENST00000403830 352 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 RPL26P37-201ENST00000411983 438 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL596448.1-201ENST00000415024 392 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 SLC35E1P1-201ENST00000419313 864 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC093155.2-201ENST00000420734 937 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 RPL12P34-201ENST00000424532 479 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 CKS1BP6-201ENST00000424932 240 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 Z99127.2-201ENST00000441426 334 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 APOOP2-201ENST00000461561 539 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC022795.1-201ENST00000473808 480 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 RN7SL441P-201ENST00000492388 296 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC138866.2-201ENST00000508650 584 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AF186190.1-201ENST00000517470 480 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 NANOGNBP2-201ENST00000544753 553 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC068446.3-201ENST00000555285 382 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC116553.2-201ENST00000564203 463 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC015720.2-201ENST00000567709 334 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC133552.5-201ENST00000604266 540 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 BNIP3P7-201ENST00000605641 516 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC135803.1-201ENST00000608748 565 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC000068.2-201ENST00000608816 460 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 CU639417.4-201ENST00000623928 207 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL596275.2-207ENST00000641188 675 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL596275.2-204ENST00000641628 552 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AL596275.2-206ENST00000641957 626 ntBASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
SND1-IT1Q9HBX3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 AP001273.1-201ENST00000624493 3152 ntBASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 AC068446.1-201ENST00000556425 1549 ntBASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.34□□□□□ -1.88
SND1-IT1Q9HBX3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RN7SKP275-201ENST00000364626 301 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC019155.1-201ENST00000382242 574 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RNU6-532P-201ENST00000384318 107 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RNU6-146P-201ENST00000384602 108 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms