Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR6867-201ENST00000610636 67 ntBASIC6.15□□□□□ -1.42
ABCA3Q99758 AP005019.3-201ENST00000620418 560 ntBASIC6.15□□□□□ -1.42
ABCA3Q99758 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ABCA3Q99758 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ABCA3Q99758 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ABCA3Q99758 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ABCA3Q99758 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ABCA3Q99758 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
ABCA3Q99758 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCA3Q99758 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ABCA3Q99758 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.14□□□□□ -1.43
ABCA3Q99758 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCA3Q99758 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCA3Q99758 RN7SKP33-201ENST00000410942 340 ntBASIC6.14□□□□□ -1.43
ABCA3Q99758 RGS17P1-201ENST00000423358 553 ntBASIC6.14□□□□□ -1.43
ABCA3Q99758 AC006326.1-201ENST00000445465 787 ntBASIC6.14□□□□□ -1.43
ABCA3Q99758 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 AL358232.1-201ENST00000448030 501 ntBASIC6.14□□□□□ -1.43
ABCA3Q99758 Y_RNA.719-201ENST00000517156 106 ntBASIC6.14□□□□□ -1.43
ABCA3Q99758 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCA3Q99758 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.14□□□□□ -1.43
ABCA3Q99758 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCA3Q99758 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCA3Q99758 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 MIR6891-201ENST00000618788 93 ntBASIC6.14□□□□□ -1.43
ABCA3Q99758 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCA3Q99758 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
ABCA3Q99758 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCA3Q99758 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ABCA3Q99758 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCA3Q99758 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.14□□□□□ -1.43
ABCA3Q99758 AL158163.1-201ENST00000603915 1649 ntBASIC6.14□□□□□ -1.43
ABCA3Q99758 AL607077.1-201ENST00000401718 499 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCA3Q99758 VN1R34P-201ENST00000447387 883 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCA3Q99758 PGBD4P4-201ENST00000509673 613 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 SNORA67.7-201ENST00000516664 135 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AC012442.3-202ENST00000636742 206 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCA3Q99758 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCA3Q99758 CPHL1P-201ENST00000461341 3407 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCA3Q99758 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCA3Q99758 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.13□□□□□ -1.43
ABCA3Q99758 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCA3Q99758 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
ABCA3Q99758 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 AL033543.1-201ENST00000623440 13454 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 RPL21P67-201ENST00000402896 478 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AL136231.1-201ENST00000429407 730 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCA3Q99758 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCA3Q99758 AC053481.1-201ENST00000467217 306 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 RN7SL132P-201ENST00000478131 296 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AC016559.2-201ENST00000510759 359 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCA3Q99758 OR8R1P-201ENST00000543943 764 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCA3Q99758 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCA3Q99758 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.13□□□□□ -1.43
ABCA3Q99758 AL161756.2-201ENST00000604597 246 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 AC113403.1-201ENST00000604910 193 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 BX005214.3-202ENST00000619809 325 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ABCA3Q99758 AL139254.3-201ENST00000641097 674 ntBASIC6.13□□□□□ -1.43
ABCA3Q99758 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ABCA3Q99758 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCA3Q99758 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCA3Q99758 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCA3Q99758 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCA3Q99758 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCA3Q99758 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
ABCA3Q99758 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCA3Q99758 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.12□□□□□ -1.43
ABCA3Q99758 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCA3Q99758 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ABCA3Q99758 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCA3Q99758 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCA3Q99758 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCA3Q99758 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCA3Q99758 SUMO2P19-201ENST00000518920 295 ntBASIC6.12□□□□□ -1.43
ABCA3Q99758 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCA3Q99758 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCA3Q99758 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms