Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AL645937.3-201ENST00000453647 936 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 RNU7-152P-201ENST00000458982 64 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 RN7SL372P-201ENST00000461982 298 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 MRE11P1-201ENST00000464884 2127 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC021220.1-201ENST00000507445 630 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 RNU6-264P-201ENST00000517134 104 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC004852.1-201ENST00000605206 154 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 TUG1_3.1-201ENST00000616187 237 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 MIR6806-201ENST00000622141 64 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC096921.2-201ENST00000561507 1916 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AF287957.1-201ENST00000607368 1595 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 PARP1P1-201ENST00000413631 3026 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 KYNUP1-201ENST00000466683 1406 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC008985.1-201ENST00000624169 2239 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AL121768.1-201ENST00000613917 2544 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 RNU4-81P-201ENST00000363561 144 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 LDHAP5-201ENST00000394996 622 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 AL591416.1-201ENST00000404015 867 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 AL136131.1-201ENST00000406079 803 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 RN7SKP188-201ENST00000410789 317 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 THEM7P-201ENST00000419556 672 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 AL031663.1-201ENST00000437445 219 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 GTF2F2P2-201ENST00000445825 721 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 SLC25A51P1-201ENST00000468432 871 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 RPL23AP41-201ENST00000484754 458 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC109481.1-201ENST00000509173 282 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC091953.2-201ENST00000623979 160 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 ZNF652P1-201ENST00000442420 1309 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 CDY7P-201ENST00000429883 1604 ntBASIC7.7□□□□□ -1.18
PHOX2BQ99453 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.7□□□□□ -1.18
PHOX2BQ99453 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PHOX2BQ99453 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms